GSE193739 CGA knockdown 2 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE193739_CGA knockdown_2_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE193739_CGA knockdown_2_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE193739_CGA knockdown_2_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE193739_CGA knockdown_2_v_1_human_up.

Results found

Linked to

	Label	Description
	GALE Gene (Entity type)	ENSG00000117308 - UDP-galactose-4-epimerase
	PPP2R2C Gene (Entity type)	ENSG00000074211 - protein phosphatase 2 regulatory subunit Bgamma
	PFDN2 Gene (Entity type)	ENSG00000143256 - prefoldin subunit 2
	ACADM Gene (Entity type)	ENSG00000117054 - acyl-CoA dehydrogenase medium chain
	RBCK1 Gene (Entity type)	ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1
	SDHD Gene (Entity type)	ENSG00000204370 - succinate dehydrogenase complex subunit D
	POLR3K Gene (Entity type)	ENSG00000161980 - RNA polymerase III subunit K
	IMPA1 Gene (Entity type)	ENSG00000133731 - inositol monophosphatase 1
	IDH3B Gene (Entity type)	ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta
	HINT1 Gene (Entity type)	ENSG00000169567 - histidine triad nucleotide binding protein 1

GALE

Gene (Entity type)

ENSG00000117308 - UDP-galactose-4-epimerase

PPP2R2C

Gene (Entity type)

ENSG00000074211 - protein phosphatase 2 regulatory subunit Bgamma

PFDN2

Gene (Entity type)

ENSG00000143256 - prefoldin subunit 2

ACADM

Gene (Entity type)

ENSG00000117054 - acyl-CoA dehydrogenase medium chain

RBCK1

Gene (Entity type)

ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1

SDHD

Gene (Entity type)

ENSG00000204370 - succinate dehydrogenase complex subunit D

POLR3K

Gene (Entity type)

ENSG00000161980 - RNA polymerase III subunit K

IMPA1

Gene (Entity type)

ENSG00000133731 - inositol monophosphatase 1

IDH3B

Gene (Entity type)

ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta

HINT1

Gene (Entity type)

ENSG00000169567 - histidine triad nucleotide binding protein 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.