PTPA Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PTPA Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PTPA Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PTPA Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PTPA Up.

Results found

Linked to

	Label	Description
	CA6 Gene (Entity type)	ENSG00000131686 - carbonic anhydrase 6
	HPCA Gene (Entity type)	ENSG00000121905 - hippocalcin
	ZNF706 Gene (Entity type)	ENSG00000120963 - zinc finger protein 706
	RNF139 Gene (Entity type)	ENSG00000170881 - ring finger protein 139
	ELOC Gene (Entity type)	ENSG00000154582 - elongin C
	ENY2 Gene (Entity type)	ENSG00000120533 - ENY2 transcription and export complex 2 subunit
	ASGR2 Gene (Entity type)	ENSG00000161944 - asialoglycoprotein receptor 2
	STAG3 Gene (Entity type)	ENSG00000066923 - STAG3 cohesin complex component
	GNG5 Gene (Entity type)	ENSG00000174021 - G protein subunit gamma 5
	NNAT Gene (Entity type)	ENSG00000053438 - neuronatin

CA6

Gene (Entity type)

ENSG00000131686 - carbonic anhydrase 6

HPCA

Gene (Entity type)

ENSG00000121905 - hippocalcin

ZNF706

Gene (Entity type)

ENSG00000120963 - zinc finger protein 706

RNF139

Gene (Entity type)

ENSG00000170881 - ring finger protein 139

ELOC

Gene (Entity type)

ENSG00000154582 - elongin C

ENY2

Gene (Entity type)

ENSG00000120533 - ENY2 transcription and export complex 2 subunit

ASGR2

Gene (Entity type)

ENSG00000161944 - asialoglycoprotein receptor 2

STAG3

Gene (Entity type)

ENSG00000066923 - STAG3 cohesin complex component

GNG5

Gene (Entity type)

ENSG00000174021 - G protein subunit gamma 5

NNAT

Gene (Entity type)

ENSG00000053438 - neuronatin

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CFDE Workbench

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.