GSE189859 GSE189861 IDH1 knockout 4 v 2 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE189859_GSE189861_IDH1 knockout_4_v_2_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE189859_GSE189861_IDH1 knockout_4_v_2_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE189859_GSE189861_IDH1 knockout_4_v_2_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE189859_GSE189861_IDH1 knockout_4_v_2_human_dn.

Results found

Linked to

	Label	Description
	ARGLU1 Gene (Entity type)	ENSG00000134884 - arginine and glutamate rich 1
	MLH1 Gene (Entity type)	ENSG00000076242 - mutL homolog 1
	PJA1 Gene (Entity type)	ENSG00000181191 - praja ring finger ubiquitin ligase 1
	SMAD4 Gene (Entity type)	ENSG00000141646 - SMAD family member 4
	ATMIN Gene (Entity type)	ENSG00000166454 - ATM interactor
	PTGR1 Gene (Entity type)	ENSG00000106853 - prostaglandin reductase 1
	SKIC8 Gene (Entity type)	ENSG00000140395 - SKI8 subunit of superkiller complex
	HIPK1 Gene (Entity type)	ENSG00000163349 - homeodomain interacting protein kinase 1
	TM9SF2 Gene (Entity type)	ENSG00000125304 - transmembrane 9 superfamily member 2
	RBM6 Gene (Entity type)	ENSG00000004534 - RNA binding motif protein 6

ARGLU1

Gene (Entity type)

ENSG00000134884 - arginine and glutamate rich 1

MLH1

Gene (Entity type)

ENSG00000076242 - mutL homolog 1

PJA1

Gene (Entity type)

ENSG00000181191 - praja ring finger ubiquitin ligase 1

SMAD4

Gene (Entity type)

ENSG00000141646 - SMAD family member 4

ATMIN

Gene (Entity type)

ENSG00000166454 - ATM interactor

PTGR1

Gene (Entity type)

ENSG00000106853 - prostaglandin reductase 1

SKIC8

Gene (Entity type)

ENSG00000140395 - SKI8 subunit of superkiller complex

HIPK1

Gene (Entity type)

ENSG00000163349 - homeodomain interacting protein kinase 1

TM9SF2

Gene (Entity type)

ENSG00000125304 - transmembrane 9 superfamily member 2

RBM6

Gene (Entity type)

ENSG00000004534 - RNA binding motif protein 6

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.