GSE189859 GSE189861 IDH1 knockout 4 v 2 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE189859_GSE189861_IDH1 knockout_4_v_2_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE189859_GSE189861_IDH1 knockout_4_v_2_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE189859_GSE189861_IDH1 knockout_4_v_2_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE189859_GSE189861_IDH1 knockout_4_v_2_human_up.

Results found

Linked to

	Label	Description
	H4C15 Gene (Entity type)	H4 clustered histone 15
	H3C7 Gene (Entity type)	H3 clustered histone 7
	LINC00665 Gene (Entity type)	long intergenic non-protein coding RNA 665
	LINC00662 Gene (Entity type)	long intergenic non-protein coding RNA 662
	MTCO2P12 Gene (Entity type)	MT-CO2 pseudogene 12
	IL3RA Gene (Entity type)	interleukin 3 receptor subunit alpha
	ZNF883 Gene (Entity type)	zinc finger protein 883
	TALAM1 Gene (Entity type)	TALAM1 transcript, MALAT1 antisense RNA
	ZNF542P Gene (Entity type)	zinc finger protein 542, pseudogene
	HEIH Gene (Entity type)	hepatocellular carcinoma up-regulated EZH2-associated long non-coding RNA

H4C15

Gene (Entity type)

H4 clustered histone 15

H3C7

Gene (Entity type)

H3 clustered histone 7

LINC00665

Gene (Entity type)

long intergenic non-protein coding RNA 665

LINC00662

Gene (Entity type)

long intergenic non-protein coding RNA 662

MTCO2P12

Gene (Entity type)

MT-CO2 pseudogene 12

IL3RA

Gene (Entity type)

interleukin 3 receptor subunit alpha

ZNF883

Gene (Entity type)

zinc finger protein 883

TALAM1

Gene (Entity type)

TALAM1 transcript, MALAT1 antisense RNA

ZNF542P

Gene (Entity type)

zinc finger protein 542, pseudogene

HEIH

Gene (Entity type)

hepatocellular carcinoma up-regulated EZH2-associated long non-coding RNA

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.