PAPSS2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PAPSS2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PAPSS2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PAPSS2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PAPSS2 Up.

Results found

Linked to

	Label	Description
	REL Gene (Entity type)	ENSG00000162924 - REL proto-oncogene, NF-kB subunit
	NARF Gene (Entity type)	ENSG00000141562 - nuclear prelamin A recognition factor
	ARMC9 Gene (Entity type)	ENSG00000135931 - armadillo repeat containing 9
	ZNF551 Gene (Entity type)	ENSG00000204519 - zinc finger protein 551
	MED6 Gene (Entity type)	ENSG00000133997 - mediator complex subunit 6
	MRPL23 Gene (Entity type)	ENSG00000214026 - mitochondrial ribosomal protein L23
	APBB1IP Gene (Entity type)	ENSG00000077420 - amyloid beta precursor protein binding family B member 1 interacting protein
	RND1 Gene (Entity type)	ENSG00000172602 - Rho family GTPase 1
	MISP Gene (Entity type)	ENSG00000099812 - mitotic spindle positioning
	SH2B2 Gene (Entity type)	ENSG00000160999 - SH2B adaptor protein 2

REL

Gene (Entity type)

ENSG00000162924 - REL proto-oncogene, NF-kB subunit

NARF

Gene (Entity type)

ENSG00000141562 - nuclear prelamin A recognition factor

ARMC9

Gene (Entity type)

ENSG00000135931 - armadillo repeat containing 9

ZNF551

Gene (Entity type)

ENSG00000204519 - zinc finger protein 551

MED6

Gene (Entity type)

ENSG00000133997 - mediator complex subunit 6

MRPL23

Gene (Entity type)

ENSG00000214026 - mitochondrial ribosomal protein L23

APBB1IP

Gene (Entity type)

ENSG00000077420 - amyloid beta precursor protein binding family B member 1 interacting protein

RND1

Gene (Entity type)

ENSG00000172602 - Rho family GTPase 1

MISP

Gene (Entity type)

ENSG00000099812 - mitotic spindle positioning

SH2B2

Gene (Entity type)

ENSG00000160999 - SH2B adaptor protein 2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.