GSE230372 KDM4A knockdown CAL-27 LEF1 1 v 2 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE230372_KDM4A knockdown_CAL-27_LEF1_1_v_2_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE230372_KDM4A knockdown_CAL-27_LEF1_1_v_2_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE230372_KDM4A knockdown_CAL-27_LEF1_1_v_2_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE230372_KDM4A knockdown_CAL-27_LEF1_1_v_2_human_up.

Results found

Linked to

	Label	Description
	TRIM16L Gene (Entity type)	tripartite motif containing 16 like (pseudogene)
	ILF3-DT Gene (Entity type)	ILF3 divergent transcript
	LINC01106 Gene (Entity type)	long intergenic non-protein coding RNA 1106
	FBXL19-AS1 Gene (Entity type)	FBXL19 antisense RNA 1
	LINC02577 Gene (Entity type)	long intergenic non-protein coding RNA 2577
	INSIG1-DT Gene (Entity type)	INSIG1 divergent transcript
	LNCOG Gene (Entity type)	lncRNA osteogenesis associated
	LINC00339 Gene (Entity type)	long intergenic non-protein coding RNA 339
	ADCY10P1 Gene (Entity type)	ADCY10 pseudogene 1
	CKMT2-AS1 Gene (Entity type)	CKMT2 antisense RNA 1

TRIM16L

Gene (Entity type)

tripartite motif containing 16 like (pseudogene)

ILF3-DT

Gene (Entity type)

ILF3 divergent transcript

LINC01106

Gene (Entity type)

long intergenic non-protein coding RNA 1106

FBXL19-AS1

Gene (Entity type)

FBXL19 antisense RNA 1

LINC02577

Gene (Entity type)

long intergenic non-protein coding RNA 2577

INSIG1-DT

Gene (Entity type)

INSIG1 divergent transcript

LNCOG

Gene (Entity type)

lncRNA osteogenesis associated

LINC00339

Gene (Entity type)

long intergenic non-protein coding RNA 339

ADCY10P1

Gene (Entity type)

ADCY10 pseudogene 1

CKMT2-AS1

Gene (Entity type)

CKMT2 antisense RNA 1

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.