GSS Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSS Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSS Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSS Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSS Up.

Results found

Linked to

	Label	Description
	SMAD2 Gene (Entity type)	ENSG00000175387 - SMAD family member 2
	CHMP2A Gene (Entity type)	ENSG00000130724 - charged multivesicular body protein 2A
	ZNF706 Gene (Entity type)	ENSG00000120963 - zinc finger protein 706
	SLC25A3 Gene (Entity type)	ENSG00000075415 - solute carrier family 25 member 3
	TM4SF20 Gene (Entity type)	ENSG00000168955 - transmembrane 4 L six family member 20
	ARC Gene (Entity type)	ENSG00000198576 - activity regulated cytoskeleton associated protein
	CD1B Gene (Entity type)	ENSG00000158485 - CD1b molecule
	OSTF1 Gene (Entity type)	ENSG00000134996 - osteoclast stimulating factor 1
	PSMC5 Gene (Entity type)	ENSG00000087191 - proteasome 26S subunit, ATPase 5
	PRPSAP1 Gene (Entity type)	ENSG00000161542 - phosphoribosyl pyrophosphate synthetase associated protein 1

SMAD2

Gene (Entity type)

ENSG00000175387 - SMAD family member 2

CHMP2A

Gene (Entity type)

ENSG00000130724 - charged multivesicular body protein 2A

ZNF706

Gene (Entity type)

ENSG00000120963 - zinc finger protein 706

SLC25A3

Gene (Entity type)

ENSG00000075415 - solute carrier family 25 member 3

TM4SF20

Gene (Entity type)

ENSG00000168955 - transmembrane 4 L six family member 20

ARC

Gene (Entity type)

ENSG00000198576 - activity regulated cytoskeleton associated protein

CD1B

Gene (Entity type)

ENSG00000158485 - CD1b molecule

OSTF1

Gene (Entity type)

ENSG00000134996 - osteoclast stimulating factor 1

PSMC5

Gene (Entity type)

ENSG00000087191 - proteasome 26S subunit, ATPase 5

PRPSAP1

Gene (Entity type)

ENSG00000161542 - phosphoribosyl pyrophosphate synthetase associated protein 1

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.