GSE203329 HCC knockout 0 v 3 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE203329_HCC knockout_0_v_3_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE203329_HCC knockout_0_v_3_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE203329_HCC knockout_0_v_3_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE203329_HCC knockout_0_v_3_human_dn.

Results found

Linked to

	Label	Description
	NORAD Gene (Entity type)	non-coding RNA activated by DNA damage
	TALAM1 Gene (Entity type)	TALAM1 transcript, MALAT1 antisense RNA
	LINC00641 Gene (Entity type)	long intergenic non-protein coding RNA 641
	TPTEP1 Gene (Entity type)	TPTE pseudogene 1
	MIR99AHG Gene (Entity type)	mir-99a-let-7c cluster host gene
	FTX Gene (Entity type)	FTX transcript, XIST regulator
	MIR9-2HG Gene (Entity type)	MIR9-2 host gene
	ANKRD36BP2 Gene (Entity type)	ankyrin repeat domain 36B pseudogene 2
	LINC00891 Gene (Entity type)	long intergenic non-protein coding RNA 891
	LINC00923 Gene (Entity type)	long intergenic non-protein coding RNA 923

NORAD

Gene (Entity type)

non-coding RNA activated by DNA damage

TALAM1

Gene (Entity type)

TALAM1 transcript, MALAT1 antisense RNA

LINC00641

Gene (Entity type)

long intergenic non-protein coding RNA 641

TPTEP1

Gene (Entity type)

TPTE pseudogene 1

MIR99AHG

Gene (Entity type)

mir-99a-let-7c cluster host gene

FTX

Gene (Entity type)

FTX transcript, XIST regulator

MIR9-2HG

Gene (Entity type)

MIR9-2 host gene

ANKRD36BP2

Gene (Entity type)

ankyrin repeat domain 36B pseudogene 2

LINC00891

Gene (Entity type)

long intergenic non-protein coding RNA 891

LINC00923

Gene (Entity type)

long intergenic non-protein coding RNA 923

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.