GSE203329 HCC knockout 0 v 3 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE203329_HCC knockout_0_v_3_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE203329_HCC knockout_0_v_3_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE203329_HCC knockout_0_v_3_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE203329_HCC knockout_0_v_3_human_dn.

Results found

Linked to

	Label	Description
	SMAD2 Gene (Entity type)	ENSG00000175387 - SMAD family member 2
	SMAD4 Gene (Entity type)	ENSG00000141646 - SMAD family member 4
	MEGF9 Gene (Entity type)	ENSG00000106780 - multiple EGF like domains 9
	HIPK1 Gene (Entity type)	ENSG00000163349 - homeodomain interacting protein kinase 1
	FANCL Gene (Entity type)	ENSG00000115392 - FA complementation group L
	PRKAR2A Gene (Entity type)	ENSG00000114302 - protein kinase cAMP-dependent type II regulatory subunit alpha
	NFIC Gene (Entity type)	ENSG00000141905 - nuclear factor I C
	ACBD3 Gene (Entity type)	ENSG00000182827 - acyl-CoA binding domain containing 3
	MED1 Gene (Entity type)	ENSG00000125686 - mediator complex subunit 1
	NPEPPS Gene (Entity type)	ENSG00000141279 - aminopeptidase puromycin sensitive

SMAD2

Gene (Entity type)

ENSG00000175387 - SMAD family member 2

SMAD4

Gene (Entity type)

ENSG00000141646 - SMAD family member 4

MEGF9

Gene (Entity type)

ENSG00000106780 - multiple EGF like domains 9

HIPK1

Gene (Entity type)

ENSG00000163349 - homeodomain interacting protein kinase 1

FANCL

Gene (Entity type)

ENSG00000115392 - FA complementation group L

PRKAR2A

Gene (Entity type)

ENSG00000114302 - protein kinase cAMP-dependent type II regulatory subunit alpha

NFIC

Gene (Entity type)

ENSG00000141905 - nuclear factor I C

ACBD3

Gene (Entity type)

ENSG00000182827 - acyl-CoA binding domain containing 3

MED1

Gene (Entity type)

ENSG00000125686 - mediator complex subunit 1

NPEPPS

Gene (Entity type)

ENSG00000141279 - aminopeptidase puromycin sensitive

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.