PKD1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PKD1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PKD1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PKD1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PKD1 Up.

Results found

Linked to

	Label	Description
	TDP1 Gene (Entity type)	ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1
	NXT1 Gene (Entity type)	ENSG00000132661 - nuclear transport factor 2 like export factor 1
	CCR5 Gene (Entity type)	ENSG00000160791 - C-C motif chemokine receptor 5
	LLGL2 Gene (Entity type)	ENSG00000073350 - LLGL scribble cell polarity complex component 2
	ATP5MC1 Gene (Entity type)	ENSG00000159199 - ATP synthase membrane subunit c locus 1
	KYAT3 Gene (Entity type)	ENSG00000137944 - kynurenine aminotransferase 3
	NIT2 Gene (Entity type)	ENSG00000114021 - nitrilase family member 2
	SNRPB2 Gene (Entity type)	ENSG00000125870 - small nuclear ribonucleoprotein polypeptide B2
	ARHGDIA Gene (Entity type)	ENSG00000141522 - Rho GDP dissociation inhibitor alpha
	IQCE Gene (Entity type)	ENSG00000106012 - IQ motif containing E

TDP1

Gene (Entity type)

ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1

NXT1

Gene (Entity type)

ENSG00000132661 - nuclear transport factor 2 like export factor 1

CCR5

Gene (Entity type)

ENSG00000160791 - C-C motif chemokine receptor 5

LLGL2

Gene (Entity type)

ENSG00000073350 - LLGL scribble cell polarity complex component 2

ATP5MC1

Gene (Entity type)

ENSG00000159199 - ATP synthase membrane subunit c locus 1

KYAT3

Gene (Entity type)

ENSG00000137944 - kynurenine aminotransferase 3

NIT2

Gene (Entity type)

ENSG00000114021 - nitrilase family member 2

SNRPB2

Gene (Entity type)

ENSG00000125870 - small nuclear ribonucleoprotein polypeptide B2

ARHGDIA

Gene (Entity type)

ENSG00000141522 - Rho GDP dissociation inhibitor alpha

IQCE

Gene (Entity type)

ENSG00000106012 - IQ motif containing E

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.