CYBA Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CYBA Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CYBA Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CYBA Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CYBA Down.

Results found

Linked to

	Label	Description
	HS3ST3A1 Gene (Entity type)	ENSG00000153976 - heparan sulfate-glucosamine 3-sulfotransferase 3A1
	COX7A2L Gene (Entity type)	ENSG00000115944 - cytochrome c oxidase subunit 7A2 like
	AGA Gene (Entity type)	ENSG00000038002 - aspartylglucosaminidase
	MRPS27 Gene (Entity type)	ENSG00000113048 - mitochondrial ribosomal protein S27
	BET1 Gene (Entity type)	ENSG00000105829 - Bet1 golgi vesicular membrane trafficking protein
	RPA2 Gene (Entity type)	ENSG00000117748 - replication protein A2
	MRPL40 Gene (Entity type)	ENSG00000185608 - mitochondrial ribosomal protein L40
	RAD54B Gene (Entity type)	ENSG00000197275 - RAD54 homolog B
	ZDHHC4 Gene (Entity type)	ENSG00000136247 - zDHHC palmitoyltransferase 4
	SRP9 Gene (Entity type)	ENSG00000143742 - signal recognition particle 9

HS3ST3A1

Gene (Entity type)

ENSG00000153976 - heparan sulfate-glucosamine 3-sulfotransferase 3A1

COX7A2L

Gene (Entity type)

ENSG00000115944 - cytochrome c oxidase subunit 7A2 like

AGA

Gene (Entity type)

ENSG00000038002 - aspartylglucosaminidase

MRPS27

Gene (Entity type)

ENSG00000113048 - mitochondrial ribosomal protein S27

BET1

Gene (Entity type)

ENSG00000105829 - Bet1 golgi vesicular membrane trafficking protein

RPA2

Gene (Entity type)

ENSG00000117748 - replication protein A2

MRPL40

Gene (Entity type)

ENSG00000185608 - mitochondrial ribosomal protein L40

RAD54B

Gene (Entity type)

ENSG00000197275 - RAD54 homolog B

ZDHHC4

Gene (Entity type)

ENSG00000136247 - zDHHC palmitoyltransferase 4

SRP9

Gene (Entity type)

ENSG00000143742 - signal recognition particle 9

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.