SMS Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SMS Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SMS Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SMS Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SMS Up.

Results found

Linked to

	Label	Description
	COX7A2L Gene (Entity type)	ENSG00000115944 - cytochrome c oxidase subunit 7A2 like
	UBAP2 Gene (Entity type)	ENSG00000137073 - ubiquitin associated protein 2
	PPID Gene (Entity type)	ENSG00000171497 - peptidylprolyl isomerase D
	ARL8B Gene (Entity type)	ENSG00000134108 - ARF like GTPase 8B
	PRDX6 Gene (Entity type)	ENSG00000117592 - peroxiredoxin 6
	SP140L Gene (Entity type)	ENSG00000185404 - SP140 like nuclear body protein
	TGM1 Gene (Entity type)	ENSG00000092295 - transglutaminase 1
	VPREB1 Gene (Entity type)	ENSG00000169575 - V-set pre-B cell surrogate light chain 1
	EIF3K Gene (Entity type)	ENSG00000178982 - eukaryotic translation initiation factor 3 subunit K
	MGMT Gene (Entity type)	ENSG00000170430 - O-6-methylguanine-DNA methyltransferase

COX7A2L

Gene (Entity type)

ENSG00000115944 - cytochrome c oxidase subunit 7A2 like

UBAP2

Gene (Entity type)

ENSG00000137073 - ubiquitin associated protein 2

PPID

Gene (Entity type)

ENSG00000171497 - peptidylprolyl isomerase D

ARL8B

Gene (Entity type)

ENSG00000134108 - ARF like GTPase 8B

PRDX6

Gene (Entity type)

ENSG00000117592 - peroxiredoxin 6

SP140L

Gene (Entity type)

ENSG00000185404 - SP140 like nuclear body protein

TGM1

Gene (Entity type)

ENSG00000092295 - transglutaminase 1

VPREB1

Gene (Entity type)

ENSG00000169575 - V-set pre-B cell surrogate light chain 1

EIF3K

Gene (Entity type)

ENSG00000178982 - eukaryotic translation initiation factor 3 subunit K

MGMT

Gene (Entity type)

ENSG00000170430 - O-6-methylguanine-DNA methyltransferase

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.