STX11 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with STX11 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with STX11 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with STX11 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with STX11 Up.

Results found

Linked to

	Label	Description
	SLC35A3 Gene (Entity type)	ENSG00000117620 - solute carrier family 35 member A3
	COQ2 Gene (Entity type)	ENSG00000173085 - coenzyme Q2, polyprenyltransferase
	RPA2 Gene (Entity type)	ENSG00000117748 - replication protein A2
	RPL29 Gene (Entity type)	ENSG00000162244 - ribosomal protein L29
	SRP9 Gene (Entity type)	ENSG00000143742 - signal recognition particle 9
	NSL1 Gene (Entity type)	ENSG00000117697 - NSL1 component of MIS12 kinetochore complex
	PLA2G12A Gene (Entity type)	ENSG00000123739 - phospholipase A2 group XIIA
	RPL10A Gene (Entity type)	ENSG00000198755 - ribosomal protein L10a
	SEC13 Gene (Entity type)	ENSG00000157020 - SEC13 homolog, nuclear pore and COPII component
	IFT52 Gene (Entity type)	ENSG00000101052 - intraflagellar transport 52

SLC35A3

Gene (Entity type)

ENSG00000117620 - solute carrier family 35 member A3

COQ2

Gene (Entity type)

ENSG00000173085 - coenzyme Q2, polyprenyltransferase

RPA2

Gene (Entity type)

ENSG00000117748 - replication protein A2

RPL29

Gene (Entity type)

ENSG00000162244 - ribosomal protein L29

SRP9

Gene (Entity type)

ENSG00000143742 - signal recognition particle 9

NSL1

Gene (Entity type)

ENSG00000117697 - NSL1 component of MIS12 kinetochore complex

PLA2G12A

Gene (Entity type)

ENSG00000123739 - phospholipase A2 group XIIA

RPL10A

Gene (Entity type)

ENSG00000198755 - ribosomal protein L10a

SEC13

Gene (Entity type)

ENSG00000157020 - SEC13 homolog, nuclear pore and COPII component

IFT52

Gene (Entity type)

ENSG00000101052 - intraflagellar transport 52

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.