GSE218773 ABL2 knockdown Hep-G2 3 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE218773_ABL2 knockdown_Hep-G2_3_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE218773_ABL2 knockdown_Hep-G2_3_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE218773_ABL2 knockdown_Hep-G2_3_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE218773_ABL2 knockdown_Hep-G2_3_v_1_human_up.

Results found

Linked to

	Label	Description
	PLOD3 Gene (Entity type)	ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
	PPP2R2C Gene (Entity type)	ENSG00000074211 - protein phosphatase 2 regulatory subunit Bgamma
	EXT2 Gene (Entity type)	ENSG00000151348 - exostosin glycosyltransferase 2
	HDAC5 Gene (Entity type)	ENSG00000108840 - histone deacetylase 5
	HS3ST3A1 Gene (Entity type)	ENSG00000153976 - heparan sulfate-glucosamine 3-sulfotransferase 3A1
	SEC16A Gene (Entity type)	ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor
	CDR2 Gene (Entity type)	ENSG00000140743 - cerebellar degeneration related protein 2
	SCCPDH Gene (Entity type)	ENSG00000143653 - saccharopine dehydrogenase (putative)
	POFUT1 Gene (Entity type)	ENSG00000101346 - protein O-fucosyltransferase 1
	MAP3K4 Gene (Entity type)	ENSG00000085511 - mitogen-activated protein kinase kinase kinase 4

PLOD3

Gene (Entity type)

ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

PPP2R2C

Gene (Entity type)

ENSG00000074211 - protein phosphatase 2 regulatory subunit Bgamma

EXT2

Gene (Entity type)

ENSG00000151348 - exostosin glycosyltransferase 2

HDAC5

Gene (Entity type)

ENSG00000108840 - histone deacetylase 5

HS3ST3A1

Gene (Entity type)

ENSG00000153976 - heparan sulfate-glucosamine 3-sulfotransferase 3A1

SEC16A

Gene (Entity type)

ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor

CDR2

Gene (Entity type)

ENSG00000140743 - cerebellar degeneration related protein 2

SCCPDH

Gene (Entity type)

ENSG00000143653 - saccharopine dehydrogenase (putative)

POFUT1

Gene (Entity type)

ENSG00000101346 - protein O-fucosyltransferase 1

MAP3K4

Gene (Entity type)

ENSG00000085511 - mitogen-activated protein kinase kinase kinase 4

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.