NXPH4 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with NXPH4 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with NXPH4 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with NXPH4 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with NXPH4 Up.

Results found

Linked to

	Label	Description
	MEX3C Gene (Entity type)	ENSG00000176624 - mex-3 RNA binding family member C
	USP36 Gene (Entity type)	ENSG00000055483 - ubiquitin specific peptidase 36
	VPS4B Gene (Entity type)	ENSG00000119541 - vacuolar protein sorting 4 homolog B
	STX16 Gene (Entity type)	ENSG00000124222 - syntaxin 16
	RUNX1T1 Gene (Entity type)	ENSG00000079102 - RUNX1 partner transcriptional co-repressor 1
	TMCC1 Gene (Entity type)	ENSG00000172765 - transmembrane and coiled-coil domain family 1
	RUFY2 Gene (Entity type)	ENSG00000204130 - RUN and FYVE domain containing 2
	ITSN2 Gene (Entity type)	ENSG00000198399 - intersectin 2
	MYOZ2 Gene (Entity type)	ENSG00000172399 - myozenin 2
	IST1 Gene (Entity type)	ENSG00000182149 - IST1 factor associated with ESCRT-III

MEX3C

Gene (Entity type)

ENSG00000176624 - mex-3 RNA binding family member C

USP36

Gene (Entity type)

ENSG00000055483 - ubiquitin specific peptidase 36

VPS4B

Gene (Entity type)

ENSG00000119541 - vacuolar protein sorting 4 homolog B

STX16

Gene (Entity type)

ENSG00000124222 - syntaxin 16

RUNX1T1

Gene (Entity type)

ENSG00000079102 - RUNX1 partner transcriptional co-repressor 1

TMCC1

Gene (Entity type)

ENSG00000172765 - transmembrane and coiled-coil domain family 1

RUFY2

Gene (Entity type)

ENSG00000204130 - RUN and FYVE domain containing 2

ITSN2

Gene (Entity type)

ENSG00000198399 - intersectin 2

MYOZ2

Gene (Entity type)

ENSG00000172399 - myozenin 2

IST1

Gene (Entity type)

ENSG00000182149 - IST1 factor associated with ESCRT-III

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.