BRDT Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with BRDT Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with BRDT Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with BRDT Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with BRDT Down.

Results found

Linked to

	Label	Description
	HIPK1 Gene (Entity type)	ENSG00000163349 - homeodomain interacting protein kinase 1
	PIGB Gene (Entity type)	ENSG00000069943 - phosphatidylinositol glycan anchor biosynthesis class B
	TOB2 Gene (Entity type)	ENSG00000183864 - transducer of ERBB2, 2
	CA3 Gene (Entity type)	ENSG00000164879 - carbonic anhydrase 3
	TMEM43 Gene (Entity type)	ENSG00000170876 - transmembrane protein 43
	MYBPC2 Gene (Entity type)	ENSG00000086967 - myosin binding protein C2
	TMCC1 Gene (Entity type)	ENSG00000172765 - transmembrane and coiled-coil domain family 1
	DPP8 Gene (Entity type)	ENSG00000074603 - dipeptidyl peptidase 8
	CSF3R Gene (Entity type)	ENSG00000119535 - colony stimulating factor 3 receptor
	DNASE1L1 Gene (Entity type)	ENSG00000013563 - deoxyribonuclease 1 like 1

HIPK1

Gene (Entity type)

ENSG00000163349 - homeodomain interacting protein kinase 1

PIGB

Gene (Entity type)

ENSG00000069943 - phosphatidylinositol glycan anchor biosynthesis class B

TOB2

Gene (Entity type)

ENSG00000183864 - transducer of ERBB2, 2

CA3

Gene (Entity type)

ENSG00000164879 - carbonic anhydrase 3

TMEM43

Gene (Entity type)

ENSG00000170876 - transmembrane protein 43

MYBPC2

Gene (Entity type)

ENSG00000086967 - myosin binding protein C2

TMCC1

Gene (Entity type)

ENSG00000172765 - transmembrane and coiled-coil domain family 1

DPP8

Gene (Entity type)

ENSG00000074603 - dipeptidyl peptidase 8

CSF3R

Gene (Entity type)

ENSG00000119535 - colony stimulating factor 3 receptor

DNASE1L1

Gene (Entity type)

ENSG00000013563 - deoxyribonuclease 1 like 1

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.