GSE207410 GSE207411 ARID1A knockdown 5 v 4 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE207410_GSE207411_ARID1A knockdown_5_v_4_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE207410_GSE207411_ARID1A knockdown_5_v_4_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE207410_GSE207411_ARID1A knockdown_5_v_4_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE207410_GSE207411_ARID1A knockdown_5_v_4_human_up.

Results found

Linked to

	Label	Description
	H4C15 Gene (Entity type)	H4 clustered histone 15
	H2BC8 Gene Gene (Entity type)	H2B clustered histone 8
	H3C7 Gene (Entity type)	H3 clustered histone 7
	RPS18 Gene (Entity type)	ribosomal protein S18
	TRIM16L Gene (Entity type)	tripartite motif containing 16 like (pseudogene)
	GTF2IP4 Gene (Entity type)	general transcription factor IIi pseudogene 4
	H2AC4 Gene (Entity type)	H2A clustered histone 4
	PURPL Gene (Entity type)	p53 upregulated regulator of p53 levels
	LUCAT1 Gene (Entity type)	lung cancer associated transcript 1
	H2BC20P Gene (Entity type)	H2B clustered histone 20, pseudogene

H4C15

Gene (Entity type)

H4 clustered histone 15

H2BC8 Gene

Gene (Entity type)

H2B clustered histone 8

H3C7

Gene (Entity type)

H3 clustered histone 7

RPS18

Gene (Entity type)

ribosomal protein S18

TRIM16L

Gene (Entity type)

tripartite motif containing 16 like (pseudogene)

GTF2IP4

Gene (Entity type)

general transcription factor IIi pseudogene 4

H2AC4

Gene (Entity type)

H2A clustered histone 4

PURPL

Gene (Entity type)

p53 upregulated regulator of p53 levels

LUCAT1

Gene (Entity type)

lung cancer associated transcript 1

H2BC20P

Gene (Entity type)

H2B clustered histone 20, pseudogene

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.