GPT Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GPT Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GPT Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GPT Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GPT Up.

Results found

Linked to

	Label	Description
	ZNF432 Gene (Entity type)	ENSG00000256087 - zinc finger protein 432
	TENM4 Gene (Entity type)	ENSG00000149256 - teneurin transmembrane protein 4
	MAP2K2 Gene (Entity type)	ENSG00000126934 - mitogen-activated protein kinase kinase 2
	ZNF593 Gene (Entity type)	ENSG00000142684 - zinc finger protein 593
	USO1 Gene (Entity type)	ENSG00000138768 - USO1 vesicle transport factor
	ADCY2 Gene (Entity type)	ENSG00000078295 - adenylate cyclase 2
	TBL2 Gene (Entity type)	ENSG00000106638 - transducin beta like 2
	BRINP1 Gene (Entity type)	ENSG00000078725 - BMP/retinoic acid inducible neural specific 1
	ENTPD6 Gene (Entity type)	ENSG00000197586 - ectonucleoside triphosphate diphosphohydrolase 6
	STK25 Gene (Entity type)	ENSG00000115694 - serine/threonine kinase 25

ZNF432

Gene (Entity type)

ENSG00000256087 - zinc finger protein 432

TENM4

Gene (Entity type)

ENSG00000149256 - teneurin transmembrane protein 4

MAP2K2

Gene (Entity type)

ENSG00000126934 - mitogen-activated protein kinase kinase 2

ZNF593

Gene (Entity type)

ENSG00000142684 - zinc finger protein 593

USO1

Gene (Entity type)

ENSG00000138768 - USO1 vesicle transport factor

ADCY2

Gene (Entity type)

ENSG00000078295 - adenylate cyclase 2

TBL2

Gene (Entity type)

ENSG00000106638 - transducin beta like 2

BRINP1

Gene (Entity type)

ENSG00000078725 - BMP/retinoic acid inducible neural specific 1

ENTPD6

Gene (Entity type)

ENSG00000197586 - ectonucleoside triphosphate diphosphohydrolase 6

STK25

Gene (Entity type)

ENSG00000115694 - serine/threonine kinase 25

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.