GSE188631 DREAM knockout HeLa 0 v 2 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE188631_DREAM knockout_HeLa_0_v_2_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE188631_DREAM knockout_HeLa_0_v_2_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE188631_DREAM knockout_HeLa_0_v_2_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE188631_DREAM knockout_HeLa_0_v_2_human_up.

Results found

Linked to

	Label	Description
	H4C15 Gene (Entity type)	H4 clustered histone 15
	SNHG1 Gene (Entity type)	small nucleolar RNA host gene 1
	PKD1P1 Gene (Entity type)	polycystin 1, transient receptor potential channel interacting pseudogene 1
	NBPF26 Gene (Entity type)	NBPF member 26
	RN7SL2 Gene (Entity type)	RNA component of signal recognition particle 7SL2
	RN7SL1 Gene (Entity type)	RNA component of signal recognition particle 7SL1
	RPL36AP37 Gene (Entity type)	ribosomal protein L36a pseudogene 37
	LINC03105 Gene (Entity type)	long intergenic non-protein coding RNA 3105
	SNX29P2 Gene (Entity type)	sorting nexin 29 pseudogene 2
	PEDS1-UBE2V1 Gene (Entity type)	PEDS1-UBE2V1 readthrough

H4C15

Gene (Entity type)

H4 clustered histone 15

SNHG1

Gene (Entity type)

small nucleolar RNA host gene 1

PKD1P1

Gene (Entity type)

polycystin 1, transient receptor potential channel interacting pseudogene 1

NBPF26

Gene (Entity type)

NBPF member 26

RN7SL2

Gene (Entity type)

RNA component of signal recognition particle 7SL2

RN7SL1

Gene (Entity type)

RNA component of signal recognition particle 7SL1

RPL36AP37

Gene (Entity type)

ribosomal protein L36a pseudogene 37

LINC03105

Gene (Entity type)

long intergenic non-protein coding RNA 3105

SNX29P2

Gene (Entity type)

sorting nexin 29 pseudogene 2

PEDS1-UBE2V1

Gene (Entity type)

PEDS1-UBE2V1 readthrough

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.