GSE125956 SYK knockdown 0 v 1 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE125956_SYK knockdown_0_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE125956_SYK knockdown_0_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE125956_SYK knockdown_0_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE125956_SYK knockdown_0_v_1_human_dn.

Results found

Linked to

	Label	Description
	RPS6 Gene (Entity type)	ENSG00000137154 - ribosomal protein S6
	PPP2R2C Gene (Entity type)	ENSG00000074211 - protein phosphatase 2 regulatory subunit Bgamma
	S1PR3 Gene (Entity type)	ENSG00000213694 - sphingosine-1-phosphate receptor 3
	HDAC5 Gene (Entity type)	ENSG00000108840 - histone deacetylase 5
	IL10RB Gene (Entity type)	ENSG00000243646 - interleukin 10 receptor subunit beta
	PTGR1 Gene (Entity type)	ENSG00000106853 - prostaglandin reductase 1
	MDH1 Gene (Entity type)	ENSG00000014641 - malate dehydrogenase 1
	PRCP Gene (Entity type)	ENSG00000137509 - prolylcarboxypeptidase
	ATP5MC3 Gene (Entity type)	ENSG00000154518 - ATP synthase membrane subunit c locus 3
	RPL5 Gene (Entity type)	ENSG00000122406 - ribosomal protein L5

RPS6

Gene (Entity type)

ENSG00000137154 - ribosomal protein S6

PPP2R2C

Gene (Entity type)

ENSG00000074211 - protein phosphatase 2 regulatory subunit Bgamma

S1PR3

Gene (Entity type)

ENSG00000213694 - sphingosine-1-phosphate receptor 3

HDAC5

Gene (Entity type)

ENSG00000108840 - histone deacetylase 5

IL10RB

Gene (Entity type)

ENSG00000243646 - interleukin 10 receptor subunit beta

PTGR1

Gene (Entity type)

ENSG00000106853 - prostaglandin reductase 1

MDH1

Gene (Entity type)

ENSG00000014641 - malate dehydrogenase 1

PRCP

Gene (Entity type)

ENSG00000137509 - prolylcarboxypeptidase

ATP5MC3

Gene (Entity type)

ENSG00000154518 - ATP synthase membrane subunit c locus 3

RPL5

Gene (Entity type)

ENSG00000122406 - ribosomal protein L5

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.