CR2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CR2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CR2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CR2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CR2 Up.

Results found

Linked to

	Label	Description
	KRTAP1-1 Gene (Entity type)	ENSG00000188581 - keratin associated protein 1-1
	NRG1 Gene (Entity type)	ENSG00000157168 - neuregulin 1
	ACAN Gene (Entity type)	ENSG00000157766 - aggrecan
	KL Gene (Entity type)	ENSG00000133116 - klotho
	SUGCT Gene (Entity type)	ENSG00000175600 - succinyl-CoA:glutarate-CoA transferase
	RBBP6 Gene (Entity type)	ENSG00000122257 - RB binding protein 6, ubiquitin ligase
	GDPD3 Gene (Entity type)	ENSG00000102886 - glycerophosphodiester phosphodiesterase domain containing 3
	CPSF4 Gene (Entity type)	ENSG00000160917 - cleavage and polyadenylation specific factor 4
	CDH16 Gene (Entity type)	ENSG00000166589 - cadherin 16
	CD79B Gene (Entity type)	ENSG00000007312 - CD79b molecule

KRTAP1-1

Gene (Entity type)

ENSG00000188581 - keratin associated protein 1-1

NRG1

Gene (Entity type)

ENSG00000157168 - neuregulin 1

ACAN

Gene (Entity type)

ENSG00000157766 - aggrecan

Gene (Entity type)

ENSG00000133116 - klotho

SUGCT

Gene (Entity type)

ENSG00000175600 - succinyl-CoA:glutarate-CoA transferase

RBBP6

Gene (Entity type)

ENSG00000122257 - RB binding protein 6, ubiquitin ligase

GDPD3

Gene (Entity type)

ENSG00000102886 - glycerophosphodiester phosphodiesterase domain containing 3

CPSF4

Gene (Entity type)

ENSG00000160917 - cleavage and polyadenylation specific factor 4

CDH16

Gene (Entity type)

ENSG00000166589 - cadherin 16

CD79B

Gene (Entity type)

ENSG00000007312 - CD79b molecule

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.