GSE195559 NOTCH1 knockout endothelial cell cardiac muscle cell stem cell 6 v 7 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_7_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_7_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_7_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_7_human_up.

Results found

Linked to

	Label	Description
	EFEMP2 Gene (Entity type)	ENSG00000172638 - EGF-like fibulin extracellular matrix protein 2
	HOXB13 Gene (Entity type)	ENSG00000159184 - homeobox B13
	MICAL3 Gene (Entity type)	ENSG00000243156 - microtubule associated monooxygenase, calponin and LIM domain containing 3
	LAMB2 Gene (Entity type)	ENSG00000172037 - laminin subunit beta 2
	ADGRB2 Gene (Entity type)	ENSG00000121753 - adhesion G protein-coupled receptor B2
	HMBOX1 Gene (Entity type)	ENSG00000147421 - homeobox containing 1
	CTHRC1 Gene (Entity type)	ENSG00000164932 - collagen triple helix repeat containing 1
	PTGR3 Gene (Entity type)	ENSG00000180011 - prostaglandin reductase 3
	MTHFR Gene (Entity type)	ENSG00000177000 - methylenetetrahydrofolate reductase
	CTDSP1 Gene (Entity type)	ENSG00000144579 - CTD small phosphatase 1

EFEMP2

Gene (Entity type)

ENSG00000172638 - EGF-like fibulin extracellular matrix protein 2

HOXB13

Gene (Entity type)

ENSG00000159184 - homeobox B13

MICAL3

Gene (Entity type)

ENSG00000243156 - microtubule associated monooxygenase, calponin and LIM domain containing 3

LAMB2

Gene (Entity type)

ENSG00000172037 - laminin subunit beta 2

ADGRB2

Gene (Entity type)

ENSG00000121753 - adhesion G protein-coupled receptor B2

HMBOX1

Gene (Entity type)

ENSG00000147421 - homeobox containing 1

CTHRC1

Gene (Entity type)

ENSG00000164932 - collagen triple helix repeat containing 1

PTGR3

Gene (Entity type)

ENSG00000180011 - prostaglandin reductase 3

MTHFR

Gene (Entity type)

ENSG00000177000 - methylenetetrahydrofolate reductase

CTDSP1

Gene (Entity type)

ENSG00000144579 - CTD small phosphatase 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.