RFX5 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with RFX5 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with RFX5 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with RFX5 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with RFX5 Up.

Results found

Linked to

	Label	Description
	MLH1 Gene (Entity type)	ENSG00000076242 - mutL homolog 1
	MAP2K3 Gene (Entity type)	ENSG00000034152 - mitogen-activated protein kinase kinase 3
	SLC35A3 Gene (Entity type)	ENSG00000117620 - solute carrier family 35 member A3
	ACOX1 Gene (Entity type)	ENSG00000161533 - acyl-CoA oxidase 1
	ARCN1 Gene (Entity type)	ENSG00000095139 - archain 1 coat protein complex I subunit delta
	ELOVL1 Gene (Entity type)	ENSG00000066322 - ELOVL fatty acid elongase 1
	CTR9 Gene (Entity type)	ENSG00000198730 - CTR9 component of Paf1/RNA polymerase II complex
	VPS4B Gene (Entity type)	ENSG00000119541 - vacuolar protein sorting 4 homolog B
	TRAK2 Gene (Entity type)	ENSG00000115993 - trafficking kinesin protein 2
	BUD31 Gene (Entity type)	ENSG00000106245 - BUD31 spliceosome associated protein

MLH1

Gene (Entity type)

ENSG00000076242 - mutL homolog 1

MAP2K3

Gene (Entity type)

ENSG00000034152 - mitogen-activated protein kinase kinase 3

SLC35A3

Gene (Entity type)

ENSG00000117620 - solute carrier family 35 member A3

ACOX1

Gene (Entity type)

ENSG00000161533 - acyl-CoA oxidase 1

ARCN1

Gene (Entity type)

ENSG00000095139 - archain 1 coat protein complex I subunit delta

ELOVL1

Gene (Entity type)

ENSG00000066322 - ELOVL fatty acid elongase 1

CTR9

Gene (Entity type)

ENSG00000198730 - CTR9 component of Paf1/RNA polymerase II complex

VPS4B

Gene (Entity type)

ENSG00000119541 - vacuolar protein sorting 4 homolog B

TRAK2

Gene (Entity type)

ENSG00000115993 - trafficking kinesin protein 2

BUD31

Gene (Entity type)

ENSG00000106245 - BUD31 spliceosome associated protein

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.