BIN2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with BIN2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with BIN2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with BIN2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with BIN2 Up.

Results found

Linked to

	Label	Description
	SNX13 Gene (Entity type)	ENSG00000071189 - sorting nexin 13
	SLC35A3 Gene (Entity type)	ENSG00000117620 - solute carrier family 35 member A3
	TTF1 Gene (Entity type)	ENSG00000125482 - transcription termination factor 1
	PPP1R7 Gene (Entity type)	ENSG00000115685 - protein phosphatase 1 regulatory subunit 7
	STN1 Gene (Entity type)	ENSG00000107960 - STN1 subunit of CST complex
	CFAP20 Gene (Entity type)	ENSG00000070761 - cilia and flagella associated protein 20
	CGGBP1 Gene (Entity type)	ENSG00000163320 - CGG triplet repeat binding protein 1
	SMAD2 Gene (Entity type)	ENSG00000175387 - SMAD family member 2
	SLC12A1 Gene (Entity type)	ENSG00000074803 - solute carrier family 12 member 1
	SPATA2L Gene (Entity type)	ENSG00000158792 - spermatogenesis associated 2 like

SNX13

Gene (Entity type)

ENSG00000071189 - sorting nexin 13

SLC35A3

Gene (Entity type)

ENSG00000117620 - solute carrier family 35 member A3

TTF1

Gene (Entity type)

ENSG00000125482 - transcription termination factor 1

PPP1R7

Gene (Entity type)

ENSG00000115685 - protein phosphatase 1 regulatory subunit 7

STN1

Gene (Entity type)

ENSG00000107960 - STN1 subunit of CST complex

CFAP20

Gene (Entity type)

ENSG00000070761 - cilia and flagella associated protein 20

CGGBP1

Gene (Entity type)

ENSG00000163320 - CGG triplet repeat binding protein 1

SMAD2

Gene (Entity type)

ENSG00000175387 - SMAD family member 2

SLC12A1

Gene (Entity type)

ENSG00000074803 - solute carrier family 12 member 1

SPATA2L

Gene (Entity type)

ENSG00000158792 - spermatogenesis associated 2 like

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.