DPEP3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with DPEP3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with DPEP3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with DPEP3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with DPEP3 Up.

Results found

Linked to

	Label	Description
	CHCHD2 Gene (Entity type)	ENSG00000106153 - coiled-coil-helix-coiled-coil-helix domain containing 2
	MRPL42 Gene (Entity type)	ENSG00000198015 - mitochondrial ribosomal protein L42
	PSMA2 Gene (Entity type)	ENSG00000106588 - proteasome 20S subunit alpha 2
	IFT25 Gene (Entity type)	ENSG00000081870 - intraflagellar transport 25
	HSPB6 Gene (Entity type)	ENSG00000004776 - heat shock protein family B (small) member 6
	MRPS33 Gene (Entity type)	ENSG00000090263 - mitochondrial ribosomal protein S33
	MRPS28 Gene (Entity type)	ENSG00000147586 - mitochondrial ribosomal protein S28
	GTF2H5 Gene (Entity type)	ENSG00000272047 - general transcription factor IIH subunit 5
	ARL5A Gene (Entity type)	ENSG00000162980 - ARF like GTPase 5A
	GLUD2 Gene (Entity type)	ENSG00000182890 - glutamate dehydrogenase 2

CHCHD2

Gene (Entity type)

ENSG00000106153 - coiled-coil-helix-coiled-coil-helix domain containing 2

MRPL42

Gene (Entity type)

ENSG00000198015 - mitochondrial ribosomal protein L42

PSMA2

Gene (Entity type)

ENSG00000106588 - proteasome 20S subunit alpha 2

IFT25

Gene (Entity type)

ENSG00000081870 - intraflagellar transport 25

HSPB6

Gene (Entity type)

ENSG00000004776 - heat shock protein family B (small) member 6

MRPS33

Gene (Entity type)

ENSG00000090263 - mitochondrial ribosomal protein S33

MRPS28

Gene (Entity type)

ENSG00000147586 - mitochondrial ribosomal protein S28

GTF2H5

Gene (Entity type)

ENSG00000272047 - general transcription factor IIH subunit 5

ARL5A

Gene (Entity type)

ENSG00000162980 - ARF like GTPase 5A

GLUD2

Gene (Entity type)

ENSG00000182890 - glutamate dehydrogenase 2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.