GSE128730 neratinib OVCAR-8 0 v 1 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE128730_neratinib_OVCAR-8_0_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE128730_neratinib_OVCAR-8_0_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE128730_neratinib_OVCAR-8_0_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE128730_neratinib_OVCAR-8_0_v_1_human_up.

Results found

Linked to

	Label	Description
	MIR4435-2HG Gene (Entity type)	MIR4435-2 host gene
	SNHG1 Gene (Entity type)	small nucleolar RNA host gene 1
	SNHG29 Gene (Entity type)	small nucleolar RNA host gene 29
	SNHG5 Gene (Entity type)	small nucleolar RNA host gene 5
	CYTOR Gene (Entity type)	cytoskeleton regulator RNA
	GFOD3P Gene (Entity type)	Gfo/Idh/MocA-like oxidoreductase domain containing 3, pseudogene
	LINC00665 Gene (Entity type)	long intergenic non-protein coding RNA 665
	LINC00839 Gene (Entity type)	long intergenic non-protein coding RNA 839
	ZNF542P Gene (Entity type)	zinc finger protein 542, pseudogene
	C22orf46P Gene (Entity type)	CTA-216E10.6

MIR4435-2HG

Gene (Entity type)

MIR4435-2 host gene

SNHG1

Gene (Entity type)

small nucleolar RNA host gene 1

SNHG29

Gene (Entity type)

small nucleolar RNA host gene 29

SNHG5

Gene (Entity type)

small nucleolar RNA host gene 5

CYTOR

Gene (Entity type)

cytoskeleton regulator RNA

GFOD3P

Gene (Entity type)

Gfo/Idh/MocA-like oxidoreductase domain containing 3, pseudogene

LINC00665

Gene (Entity type)

long intergenic non-protein coding RNA 665

LINC00839

Gene (Entity type)

long intergenic non-protein coding RNA 839

ZNF542P

Gene (Entity type)

zinc finger protein 542, pseudogene

C22orf46P

Gene (Entity type)

CTA-216E10.6

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.