SPEG Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SPEG Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SPEG Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SPEG Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SPEG Down.

Results found

Linked to

	Label	Description
	TICAM1 Gene (Entity type)	ENSG00000127666 - TIR domain containing adaptor molecule 1
	SNAPC3 Gene (Entity type)	ENSG00000164975 - small nuclear RNA activating complex polypeptide 3
	BECN1 Gene (Entity type)	ENSG00000126581 - beclin 1
	REL Gene (Entity type)	ENSG00000162924 - REL proto-oncogene, NF-kB subunit
	SH2D3A Gene (Entity type)	ENSG00000125731 - SH2 domain containing 3A
	STX12 Gene (Entity type)	ENSG00000117758 - syntaxin 12
	STX18 Gene (Entity type)	ENSG00000168818 - syntaxin 18
	RAB8B Gene (Entity type)	ENSG00000166128 - RAB8B, member RAS oncogene family
	FEM1C Gene (Entity type)	ENSG00000145780 - fem-1 homolog C
	ZNF23 Gene (Entity type)	ENSG00000167377 - zinc finger protein 23

TICAM1

Gene (Entity type)

ENSG00000127666 - TIR domain containing adaptor molecule 1

SNAPC3

Gene (Entity type)

ENSG00000164975 - small nuclear RNA activating complex polypeptide 3

BECN1

Gene (Entity type)

ENSG00000126581 - beclin 1

REL

Gene (Entity type)

ENSG00000162924 - REL proto-oncogene, NF-kB subunit

SH2D3A

Gene (Entity type)

ENSG00000125731 - SH2 domain containing 3A

STX12

Gene (Entity type)

ENSG00000117758 - syntaxin 12

STX18

Gene (Entity type)

ENSG00000168818 - syntaxin 18

RAB8B

Gene (Entity type)

ENSG00000166128 - RAB8B, member RAS oncogene family

FEM1C

Gene (Entity type)

ENSG00000145780 - fem-1 homolog C

ZNF23

Gene (Entity type)

ENSG00000167377 - zinc finger protein 23

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CFDE Workbench

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.