GSE139540 menadione 4 v 1 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE139540_menadione_4_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE139540_menadione_4_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE139540_menadione_4_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE139540_menadione_4_v_1_human_up.

Results found

Linked to

	Label	Description
	H3-7 Gene (Entity type)	H3.7 histone (putative)
	CRNDE Gene (Entity type)	colorectal neoplasia differentially expressed
	DLEU1 Gene (Entity type)	deleted in lymphocytic leukemia 1
	H3C6 Gene (Entity type)	H3 clustered histone 6
	FMC1-LUC7L2 Gene (Entity type)	FMC1-LUC7L2 readthrough
	ZNF496-DT Gene (Entity type)	ZNF496 divergent transcript
	UBA6-DT Gene (Entity type)	UBA6 divergent transcript
	SDHAP4 Gene (Entity type)	SDHA pseudogene 4
	MAP3K9-DT Gene (Entity type)	MAP3K9 divergent transcript
	RNF32-DT Gene (Entity type)	RNF32 divergent transcript

H3-7

Gene (Entity type)

H3.7 histone (putative)

CRNDE

Gene (Entity type)

colorectal neoplasia differentially expressed

DLEU1

Gene (Entity type)

deleted in lymphocytic leukemia 1

H3C6

Gene (Entity type)

H3 clustered histone 6

FMC1-LUC7L2

Gene (Entity type)

FMC1-LUC7L2 readthrough

ZNF496-DT

Gene (Entity type)

ZNF496 divergent transcript

UBA6-DT

Gene (Entity type)

UBA6 divergent transcript

SDHAP4

Gene (Entity type)

SDHA pseudogene 4

MAP3K9-DT

Gene (Entity type)

MAP3K9 divergent transcript

RNF32-DT

Gene (Entity type)

RNF32 divergent transcript

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.