MATK Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with MATK Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with MATK Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with MATK Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with MATK Up.

Results found

Linked to

	Label	Description
	MYOM1 Gene (Entity type)	myomesin 1
	CYP11B1 Gene (Entity type)	cytochrome P450 family 11 subfamily B member 1
	PTBP2 Gene (Entity type)	polypyrimidine tract binding protein 2
	EMC2 Gene (Entity type)	ER membrane protein complex subunit 2
	AHDC1 Gene (Entity type)	AT-hook DNA binding motif containing 1
	CDC123 Gene (Entity type)	cell division cycle 123
	MRPS28 Gene (Entity type)	mitochondrial ribosomal protein S28
	RBCK1 Gene (Entity type)	RANBP2-type and C3HC4-type zinc finger containing 1
	EIF1B Gene (Entity type)	eukaryotic translation initiation factor 1B
	VPS16 Gene (Entity type)	VPS16 core subunit of CORVET and HOPS complexes

MYOM1

Gene (Entity type)

myomesin 1

CYP11B1

Gene (Entity type)

cytochrome P450 family 11 subfamily B member 1

PTBP2

Gene (Entity type)

polypyrimidine tract binding protein 2

EMC2

Gene (Entity type)

ER membrane protein complex subunit 2

AHDC1

Gene (Entity type)

AT-hook DNA binding motif containing 1

CDC123

Gene (Entity type)

cell division cycle 123

MRPS28

Gene (Entity type)

mitochondrial ribosomal protein S28

RBCK1

Gene (Entity type)

RANBP2-type and C3HC4-type zinc finger containing 1

EIF1B

Gene (Entity type)

eukaryotic translation initiation factor 1B

VPS16

Gene (Entity type)

VPS16 core subunit of CORVET and HOPS complexes

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.