GSE133927 PTEN p53 Meox1 knockdown BT-549 RNA Small Interfering 1 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE133927_PTEN_p53_Meox1 knockdown_BT-549_RNA Small Interfering_1_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE133927_PTEN_p53_Meox1 knockdown_BT-549_RNA Small Interfering_1_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE133927_PTEN_p53_Meox1 knockdown_BT-549_RNA Small Interfering_1_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE133927_PTEN_p53_Meox1 knockdown_BT-549_RNA Small Interfering_1_v_0_human_up.

Results found

Linked to

	Label	Description
	ACADM Gene (Entity type)	ENSG00000117054 - acyl-CoA dehydrogenase medium chain
	CISH Gene (Entity type)	ENSG00000114737 - cytokine inducible SH2 containing protein
	GRB2 Gene (Entity type)	ENSG00000177885 - growth factor receptor bound protein 2
	RFK Gene (Entity type)	ENSG00000135002 - riboflavin kinase
	PSMB2 Gene (Entity type)	ENSG00000126067 - proteasome 20S subunit beta 2
	PPP2CB Gene (Entity type)	ENSG00000104695 - protein phosphatase 2 catalytic subunit beta
	IDH3B Gene (Entity type)	ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta
	CCNC Gene (Entity type)	ENSG00000112237 - cyclin C
	CROT Gene (Entity type)	ENSG00000005469 - carnitine O-octanoyltransferase
	TM9SF2 Gene (Entity type)	ENSG00000125304 - transmembrane 9 superfamily member 2

ACADM

Gene (Entity type)

ENSG00000117054 - acyl-CoA dehydrogenase medium chain

CISH

Gene (Entity type)

ENSG00000114737 - cytokine inducible SH2 containing protein

GRB2

Gene (Entity type)

ENSG00000177885 - growth factor receptor bound protein 2

RFK

Gene (Entity type)

ENSG00000135002 - riboflavin kinase

PSMB2

Gene (Entity type)

ENSG00000126067 - proteasome 20S subunit beta 2

PPP2CB

Gene (Entity type)

ENSG00000104695 - protein phosphatase 2 catalytic subunit beta

IDH3B

Gene (Entity type)

ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta

CCNC

Gene (Entity type)

ENSG00000112237 - cyclin C

CROT

Gene (Entity type)

ENSG00000005469 - carnitine O-octanoyltransferase

TM9SF2

Gene (Entity type)

ENSG00000125304 - transmembrane 9 superfamily member 2

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.