CKS2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CKS2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CKS2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CKS2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CKS2 Up.

Results found

Linked to

	Label	Description
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	GSK3B Gene (Entity type)	ENSG00000082701 - glycogen synthase kinase 3 beta
	PPP2CB Gene (Entity type)	ENSG00000104695 - protein phosphatase 2 catalytic subunit beta
	GABPB1 Gene (Entity type)	ENSG00000104064 - GA binding protein transcription factor subunit beta 1
	MRPS7 Gene (Entity type)	ENSG00000125445 - mitochondrial ribosomal protein S7
	PLXDC1 Gene (Entity type)	ENSG00000161381 - plexin domain containing 1
	LANCL2 Gene (Entity type)	ENSG00000132434 - LanC like glutathione S-transferase 2
	MEF2A Gene (Entity type)	ENSG00000068305 - myocyte enhancer factor 2A
	NARF Gene (Entity type)	ENSG00000141562 - nuclear prelamin A recognition factor
	PSMD12 Gene (Entity type)	ENSG00000197170 - proteasome 26S subunit, non-ATPase 12

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

GSK3B

Gene (Entity type)

ENSG00000082701 - glycogen synthase kinase 3 beta

PPP2CB

Gene (Entity type)

ENSG00000104695 - protein phosphatase 2 catalytic subunit beta

GABPB1

Gene (Entity type)

ENSG00000104064 - GA binding protein transcription factor subunit beta 1

MRPS7

Gene (Entity type)

ENSG00000125445 - mitochondrial ribosomal protein S7

PLXDC1

Gene (Entity type)

ENSG00000161381 - plexin domain containing 1

LANCL2

Gene (Entity type)

ENSG00000132434 - LanC like glutathione S-transferase 2

MEF2A

Gene (Entity type)

ENSG00000068305 - myocyte enhancer factor 2A

NARF

Gene (Entity type)

ENSG00000141562 - nuclear prelamin A recognition factor

PSMD12

Gene (Entity type)

ENSG00000197170 - proteasome 26S subunit, non-ATPase 12

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.