GSE221577 PIK3R1 knockout 2 v 5 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE221577_PIK3R1 knockout_2_v_5_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE221577_PIK3R1 knockout_2_v_5_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE221577_PIK3R1 knockout_2_v_5_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE221577_PIK3R1 knockout_2_v_5_human_up.

Results found

Linked to

	Label	Description
	GPSM3 Gene (Entity type)	G protein signaling modulator 3
	H3-3A Gene (Entity type)	H3.3 histone A
	DANCR Gene (Entity type)	differentiation antagonizing non-protein coding RNA
	SNHG4 Gene (Entity type)	small nucleolar RNA host gene 4
	GTF2IP4 Gene (Entity type)	general transcription factor IIi pseudogene 4
	TP53TG1 Gene (Entity type)	TP53 target 1
	TMPO-AS1 Gene (Entity type)	TMPO antisense RNA 1
	LOXL1-AS1 Gene (Entity type)	LOXL1 antisense RNA 1
	LINC00847 Gene (Entity type)	long intergenic non-protein coding RNA 847
	TOX-DT Gene (Entity type)	TOX divergent transcript

GPSM3

Gene (Entity type)

G protein signaling modulator 3

H3-3A

Gene (Entity type)

H3.3 histone A

DANCR

Gene (Entity type)

differentiation antagonizing non-protein coding RNA

SNHG4

Gene (Entity type)

small nucleolar RNA host gene 4

GTF2IP4

Gene (Entity type)

general transcription factor IIi pseudogene 4

TP53TG1

Gene (Entity type)

TP53 target 1

TMPO-AS1

Gene (Entity type)

TMPO antisense RNA 1

LOXL1-AS1

Gene (Entity type)

LOXL1 antisense RNA 1

LINC00847

Gene (Entity type)

long intergenic non-protein coding RNA 847

TOX-DT

Gene (Entity type)

TOX divergent transcript

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.