PGM3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PGM3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PGM3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PGM3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PGM3 Up.

Results found

Linked to

	Label	Description
	HEY2 Gene (Entity type)	ENSG00000135547 - hes related family bHLH transcription factor with YRPW motif 2
	GSS Gene (Entity type)	ENSG00000100983 - glutathione synthetase
	TM6SF1 Gene (Entity type)	ENSG00000136404 - transmembrane 6 superfamily member 1
	DDRGK1 Gene (Entity type)	ENSG00000198171 - DDRGK domain containing 1
	BSCL2 Gene (Entity type)	ENSG00000168000 - BSCL2 lipid droplet biogenesis associated, seipin
	ADNP Gene (Entity type)	ENSG00000101126 - activity dependent neuroprotector homeobox
	CDK5R1 Gene (Entity type)	ENSG00000176749 - cyclin dependent kinase 5 regulatory subunit 1
	PANK2 Gene (Entity type)	ENSG00000125779 - pantothenate kinase 2
	AP2A2 Gene (Entity type)	ENSG00000183020 - adaptor related protein complex 2 subunit alpha 2
	PWWP3A Gene (Entity type)	ENSG00000160953 - PWWP domain containing 3A, DNA repair factor

HEY2

Gene (Entity type)

ENSG00000135547 - hes related family bHLH transcription factor with YRPW motif 2

GSS

Gene (Entity type)

ENSG00000100983 - glutathione synthetase

TM6SF1

Gene (Entity type)

ENSG00000136404 - transmembrane 6 superfamily member 1

DDRGK1

Gene (Entity type)

ENSG00000198171 - DDRGK domain containing 1

BSCL2

Gene (Entity type)

ENSG00000168000 - BSCL2 lipid droplet biogenesis associated, seipin

ADNP

Gene (Entity type)

ENSG00000101126 - activity dependent neuroprotector homeobox

CDK5R1

Gene (Entity type)

ENSG00000176749 - cyclin dependent kinase 5 regulatory subunit 1

PANK2

Gene (Entity type)

ENSG00000125779 - pantothenate kinase 2

AP2A2

Gene (Entity type)

ENSG00000183020 - adaptor related protein complex 2 subunit alpha 2

PWWP3A

Gene (Entity type)

ENSG00000160953 - PWWP domain containing 3A, DNA repair factor

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CFDE Workbench

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.