GSE190310 SF3B4 knockdown RNA Small Interfering 0 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

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Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE190310_SF3B4 knockdown_RNA Small Interfering_0_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE190310_SF3B4 knockdown_RNA Small Interfering_0_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE190310_SF3B4 knockdown_RNA Small Interfering_0_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE190310_SF3B4 knockdown_RNA Small Interfering_0_v_1_human_up.

Results found

Linked to

	Label	Description
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	GSK3B Gene (Entity type)	ENSG00000082701 - glycogen synthase kinase 3 beta
	NRAS Gene (Entity type)	ENSG00000213281 - NRAS proto-oncogene, GTPase
	CAT Gene (Entity type)	ENSG00000121691 - catalase
	DAP Gene (Entity type)	ENSG00000112977 - death associated protein
	HDAC5 Gene (Entity type)	ENSG00000108840 - histone deacetylase 5
	NRG1 Gene (Entity type)	ENSG00000157168 - neuregulin 1
	DYNLL2 Gene (Entity type)	ENSG00000264364 - dynein light chain LC8-type 2
	THRA Gene (Entity type)	ENSG00000126351 - thyroid hormone receptor alpha
	ULK1 Gene (Entity type)	ENSG00000177169 - unc-51 like autophagy activating kinase 1

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

GSK3B

Gene (Entity type)

ENSG00000082701 - glycogen synthase kinase 3 beta

NRAS

Gene (Entity type)

ENSG00000213281 - NRAS proto-oncogene, GTPase

CAT

Gene (Entity type)

ENSG00000121691 - catalase

DAP

Gene (Entity type)

ENSG00000112977 - death associated protein

HDAC5

Gene (Entity type)

ENSG00000108840 - histone deacetylase 5

NRG1

Gene (Entity type)

ENSG00000157168 - neuregulin 1

DYNLL2

Gene (Entity type)

ENSG00000264364 - dynein light chain LC8-type 2

THRA

Gene (Entity type)

ENSG00000126351 - thyroid hormone receptor alpha

ULK1

Gene (Entity type)

ENSG00000177169 - unc-51 like autophagy activating kinase 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.