VSIG2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with VSIG2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with VSIG2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with VSIG2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with VSIG2 Up.

Results found

Linked to

	Label	Description
	RASIP1 Gene (Entity type)	ENSG00000105538 - Ras interacting protein 1
	PLXDC1 Gene (Entity type)	ENSG00000161381 - plexin domain containing 1
	MSANTD2 Gene (Entity type)	ENSG00000120458 - Myb/SANT DNA binding domain containing 2
	ANKS1A Gene (Entity type)	ENSG00000064999 - ankyrin repeat and sterile alpha motif domain containing 1A
	CLDN5 Gene (Entity type)	ENSG00000184113 - claudin 5
	RNF4 Gene (Entity type)	ENSG00000063978 - ring finger protein 4
	SNX24 Gene (Entity type)	ENSG00000064652 - sorting nexin 24
	EBI3 Gene (Entity type)	ENSG00000105246 - Epstein-Barr virus induced 3
	SLC17A6 Gene (Entity type)	ENSG00000091664 - solute carrier family 17 member 6

RASIP1

Gene (Entity type)

ENSG00000105538 - Ras interacting protein 1

PLXDC1

Gene (Entity type)

ENSG00000161381 - plexin domain containing 1

MSANTD2

Gene (Entity type)

ENSG00000120458 - Myb/SANT DNA binding domain containing 2

ANKS1A

Gene (Entity type)

ENSG00000064999 - ankyrin repeat and sterile alpha motif domain containing 1A

CLDN5

Gene (Entity type)

ENSG00000184113 - claudin 5

RNF4

Gene (Entity type)

ENSG00000063978 - ring finger protein 4

SNX24

Gene (Entity type)

ENSG00000064652 - sorting nexin 24

EBI3

Gene (Entity type)

ENSG00000105246 - Epstein-Barr virus induced 3

SLC17A6

Gene (Entity type)

ENSG00000091664 - solute carrier family 17 member 6

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.