TIGD3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with TIGD3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with TIGD3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with TIGD3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with TIGD3 Up.

Results found

Linked to

	Label	Description
	USP9X Gene (Entity type)	ENSG00000124486 - ubiquitin specific peptidase 9 X-linked
	GTF2H3 Gene (Entity type)	ENSG00000111358 - general transcription factor IIH subunit 3
	TOB2 Gene (Entity type)	ENSG00000183864 - transducer of ERBB2, 2
	CYB5R3 Gene (Entity type)	ENSG00000100243 - cytochrome b5 reductase 3
	TANC2 Gene (Entity type)	ENSG00000170921 - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
	KLC1 Gene (Entity type)	ENSG00000126214 - kinesin light chain 1
	ELOB Gene (Entity type)	ENSG00000103363 - elongin B
	ZFHX3 Gene (Entity type)	ENSG00000140836 - zinc finger homeobox 3
	MGRN1 Gene (Entity type)	ENSG00000102858 - mahogunin ring finger 1
	DIP2A Gene (Entity type)	ENSG00000160305 - DIP2 acetate--CoA ligase A

USP9X

Gene (Entity type)

ENSG00000124486 - ubiquitin specific peptidase 9 X-linked

GTF2H3

Gene (Entity type)

ENSG00000111358 - general transcription factor IIH subunit 3

TOB2

Gene (Entity type)

ENSG00000183864 - transducer of ERBB2, 2

CYB5R3

Gene (Entity type)

ENSG00000100243 - cytochrome b5 reductase 3

TANC2

Gene (Entity type)

ENSG00000170921 - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2

KLC1

Gene (Entity type)

ENSG00000126214 - kinesin light chain 1

ELOB

Gene (Entity type)

ENSG00000103363 - elongin B

ZFHX3

Gene (Entity type)

ENSG00000140836 - zinc finger homeobox 3

MGRN1

Gene (Entity type)

ENSG00000102858 - mahogunin ring finger 1

DIP2A

Gene (Entity type)

ENSG00000160305 - DIP2 acetate--CoA ligase A

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.