LTC4S Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with LTC4S Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with LTC4S Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with LTC4S Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with LTC4S Down.

Results found

Linked to

	Label	Description
	SMAD4 Gene (Entity type)	ENSG00000141646 - SMAD family member 4
	SDHD Gene (Entity type)	ENSG00000204370 - succinate dehydrogenase complex subunit D
	PPP2CB Gene (Entity type)	ENSG00000104695 - protein phosphatase 2 catalytic subunit beta
	NDUFB6 Gene (Entity type)	ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6
	GABPB1 Gene (Entity type)	ENSG00000104064 - GA binding protein transcription factor subunit beta 1
	RAB1A Gene (Entity type)	ENSG00000138069 - RAB1A, member RAS oncogene family
	TMPRSS11E Gene (Entity type)	ENSG00000087128 - transmembrane serine protease 11E
	CLIP1 Gene (Entity type)	ENSG00000130779 - CAP-Gly domain containing linker protein 1
	MSANTD2 Gene (Entity type)	ENSG00000120458 - Myb/SANT DNA binding domain containing 2
	ZMYND11 Gene (Entity type)	ENSG00000015171 - zinc finger MYND-type containing 11

SMAD4

Gene (Entity type)

ENSG00000141646 - SMAD family member 4

SDHD

Gene (Entity type)

ENSG00000204370 - succinate dehydrogenase complex subunit D

PPP2CB

Gene (Entity type)

ENSG00000104695 - protein phosphatase 2 catalytic subunit beta

NDUFB6

Gene (Entity type)

ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6

GABPB1

Gene (Entity type)

ENSG00000104064 - GA binding protein transcription factor subunit beta 1

RAB1A

Gene (Entity type)

ENSG00000138069 - RAB1A, member RAS oncogene family

TMPRSS11E

Gene (Entity type)

ENSG00000087128 - transmembrane serine protease 11E

CLIP1

Gene (Entity type)

ENSG00000130779 - CAP-Gly domain containing linker protein 1

MSANTD2

Gene (Entity type)

ENSG00000120458 - Myb/SANT DNA binding domain containing 2

ZMYND11

Gene (Entity type)

ENSG00000015171 - zinc finger MYND-type containing 11

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.