GSE238116 EGR1 HCC overexpression MHCC97-H PLC-PRF-5 3 v 2 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_3_v_2_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_3_v_2_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_3_v_2_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_3_v_2_human_dn.

Results found

Linked to

	Label	Description
	RPS18 Gene (Entity type)	ENSG00000231500 - ribosomal protein S18
	NBPF8 Gene (Entity type)	ENSG00000270231 - NBPF member 8
	CSF2RA Gene (Entity type)	ENSG00000292357 - colony stimulating factor 2 receptor subunit alpha
	RPSA2 Gene (Entity type)	ENSG00000288920 - ribosomal protein SA 2
	GFOD3P Gene (Entity type)	ENSG00000293478 - Gfo/Idh/MocA-like oxidoreductase domain containing 3, pseudogene
	MRPL45 Gene (Entity type)	ENSG00000278845 - mitochondrial ribosomal protein L45
	SNHG15 Gene (Entity type)	ENSG00000232956 - small nucleolar RNA host gene 15
	LOC389906 Gene (Entity type)	ENSG00000285756 - zinc finger protein 839 pseudogene
	SNHG17 Gene (Entity type)	ENSG00000196756 - small nucleolar RNA host gene 17
	MIR1915HG Gene (Entity type)	ENSG00000204682 - MIR1915 host gene

RPS18

Gene (Entity type)

ENSG00000231500 - ribosomal protein S18

NBPF8

Gene (Entity type)

ENSG00000270231 - NBPF member 8

CSF2RA

Gene (Entity type)

ENSG00000292357 - colony stimulating factor 2 receptor subunit alpha

RPSA2

Gene (Entity type)

ENSG00000288920 - ribosomal protein SA 2

GFOD3P

Gene (Entity type)

ENSG00000293478 - Gfo/Idh/MocA-like oxidoreductase domain containing 3, pseudogene

MRPL45

Gene (Entity type)

ENSG00000278845 - mitochondrial ribosomal protein L45

SNHG15

Gene (Entity type)

ENSG00000232956 - small nucleolar RNA host gene 15

LOC389906

Gene (Entity type)

ENSG00000285756 - zinc finger protein 839 pseudogene

SNHG17

Gene (Entity type)

ENSG00000196756 - small nucleolar RNA host gene 17

MIR1915HG

Gene (Entity type)

ENSG00000204682 - MIR1915 host gene

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.