PNCK Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PNCK Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PNCK Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PNCK Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PNCK Up.

Results found

Linked to

	Label	Description
	NXT1 Gene (Entity type)	ENSG00000132661 - nuclear transport factor 2 like export factor 1
	MZT2A Gene (Entity type)	ENSG00000173272 - mitotic spindle organizing protein 2A
	DDRGK1 Gene (Entity type)	ENSG00000198171 - DDRGK domain containing 1
	TAF10 Gene (Entity type)	ENSG00000166337 - TATA-box binding protein associated factor 10
	MRPL34 Gene (Entity type)	ENSG00000130312 - mitochondrial ribosomal protein L34
	TDP1 Gene (Entity type)	ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1
	SVEP1 Gene (Entity type)	ENSG00000165124 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
	SUGCT Gene (Entity type)	ENSG00000175600 - succinyl-CoA:glutarate-CoA transferase
	ORMDL2 Gene (Entity type)	ENSG00000123353 - ORMDL sphingolipid biosynthesis regulator 2
	MKKS Gene (Entity type)	ENSG00000125863 - MKKS centrosomal shuttling protein

NXT1

Gene (Entity type)

ENSG00000132661 - nuclear transport factor 2 like export factor 1

MZT2A

Gene (Entity type)

ENSG00000173272 - mitotic spindle organizing protein 2A

DDRGK1

Gene (Entity type)

ENSG00000198171 - DDRGK domain containing 1

TAF10

Gene (Entity type)

ENSG00000166337 - TATA-box binding protein associated factor 10

MRPL34

Gene (Entity type)

ENSG00000130312 - mitochondrial ribosomal protein L34

TDP1

Gene (Entity type)

ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1

SVEP1

Gene (Entity type)

ENSG00000165124 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1

SUGCT

Gene (Entity type)

ENSG00000175600 - succinyl-CoA:glutarate-CoA transferase

ORMDL2

Gene (Entity type)

ENSG00000123353 - ORMDL sphingolipid biosynthesis regulator 2

MKKS

Gene (Entity type)

ENSG00000125863 - MKKS centrosomal shuttling protein

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.