GSE246983 CDK12 knockdown LNCaP C4-2 Cyclin-Dependent Kinases 1 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE246983_CDK12 knockdown_LNCaP C4-2_Cyclin-Dependent Kinases_1_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE246983_CDK12 knockdown_LNCaP C4-2_Cyclin-Dependent Kinases_1_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE246983_CDK12 knockdown_LNCaP C4-2_Cyclin-Dependent Kinases_1_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE246983_CDK12 knockdown_LNCaP C4-2_Cyclin-Dependent Kinases_1_v_0_human_dn.

Results found

Linked to

	Label	Description
	STARD4-AS1 Gene (Entity type)	ENSG00000246859 - STARD4 antisense RNA 1
	LOC728488 Gene (Entity type)	ENSG00000250138 - POM121 membrane glycoprotein (rat) pseudogene
	SCHLAP1 Gene (Entity type)	ENSG00000281131 - SWI/SNF complex antagonist associated with prostate cancer 1
	LINC03046 Gene (Entity type)	ENSG00000224817 - long intergenic non-protein coding RNA 3046
	KRT8P18 Gene (Entity type)	ENSG00000228767 - keratin 8 pseudogene 18
	ZNF350-AS1 Gene (Entity type)	ENSG00000269235 - ZNF350 antisense RNA 1
	RPL11P3 Gene (Entity type)	ENSG00000213613 - ribosomal protein L11 pseudogene 3
	LOC124900697 Gene (Entity type)	ENSG00000289643 - uncharacterized LOC124900697
	LOC124909451 Gene (Entity type)	ENSG00000288787 - uncharacterized LOC124909451
	LOC100422317 Gene (Entity type)	ENSG00000267430 - proteasome 26S subunit, ATPase 5 pseudogene

STARD4-AS1

Gene (Entity type)

ENSG00000246859 - STARD4 antisense RNA 1

LOC728488

Gene (Entity type)

ENSG00000250138 - POM121 membrane glycoprotein (rat) pseudogene

SCHLAP1

Gene (Entity type)

ENSG00000281131 - SWI/SNF complex antagonist associated with prostate cancer 1

LINC03046

Gene (Entity type)

ENSG00000224817 - long intergenic non-protein coding RNA 3046

KRT8P18

Gene (Entity type)

ENSG00000228767 - keratin 8 pseudogene 18

ZNF350-AS1

Gene (Entity type)

ENSG00000269235 - ZNF350 antisense RNA 1

RPL11P3

Gene (Entity type)

ENSG00000213613 - ribosomal protein L11 pseudogene 3

LOC124900697

Gene (Entity type)

ENSG00000289643 - uncharacterized LOC124900697

LOC124909451

Gene (Entity type)

ENSG00000288787 - uncharacterized LOC124909451

LOC100422317

Gene (Entity type)

ENSG00000267430 - proteasome 26S subunit, ATPase 5 pseudogene

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.