GSE163175 Bmi1 knockdown QBC939 RNA Messenger 0 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE163175_Bmi1 knockdown_QBC939_RNA Messenger_0_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE163175_Bmi1 knockdown_QBC939_RNA Messenger_0_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE163175_Bmi1 knockdown_QBC939_RNA Messenger_0_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE163175_Bmi1 knockdown_QBC939_RNA Messenger_0_v_1_human_up.

Results found

Linked to

	Label	Description
	CRNDE Gene (Entity type)	ENSG00000245694 - colorectal neoplasia differentially expressed
	COLCA1 Gene (Entity type)	ENSG00000196167 - colorectal cancer associated 1
	LINC00261 Gene (Entity type)	ENSG00000259974 - long intergenic non-protein coding RNA 261
	MUC12-AS1 Gene (Entity type)	ENSG00000227053 - MUC12 antisense RNA 1
	CCZ1P-OR7E38P Gene (Entity type)	ENSG00000285725 - CCZ1P-OR7E38P readthrough
	RNU2-2 Gene (Entity type)	ENSG00000222328 - RNA, U2 small nuclear 2
	DNAJB14 Gene (Entity type)	ENSG00000164031 - DnaJ heat shock protein family (Hsp40) member B14
	PGM3 Gene (Entity type)	ENSG00000013375 - phosphoglucomutase 3
	ODF2L Gene (Entity type)	ENSG00000122417 - outer dense fiber of sperm tails 2 like
	HOOK1 Gene (Entity type)	ENSG00000134709 - hook microtubule tethering protein 1

CRNDE

Gene (Entity type)

ENSG00000245694 - colorectal neoplasia differentially expressed

COLCA1

Gene (Entity type)

ENSG00000196167 - colorectal cancer associated 1

LINC00261

Gene (Entity type)

ENSG00000259974 - long intergenic non-protein coding RNA 261

MUC12-AS1

Gene (Entity type)

ENSG00000227053 - MUC12 antisense RNA 1

CCZ1P-OR7E38P

Gene (Entity type)

ENSG00000285725 - CCZ1P-OR7E38P readthrough

RNU2-2

Gene (Entity type)

ENSG00000222328 - RNA, U2 small nuclear 2

DNAJB14

Gene (Entity type)

ENSG00000164031 - DnaJ heat shock protein family (Hsp40) member B14

PGM3

Gene (Entity type)

ENSG00000013375 - phosphoglucomutase 3

ODF2L

Gene (Entity type)

ENSG00000122417 - outer dense fiber of sperm tails 2 like

HOOK1

Gene (Entity type)

ENSG00000134709 - hook microtubule tethering protein 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.