EOMES Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with EOMES Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with EOMES Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with EOMES Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with EOMES Up.

Results found

Linked to

	Label	Description
	TPRKB Gene (Entity type)	ENSG00000144034 - TP53RK binding protein
	SLC35A3 Gene (Entity type)	ENSG00000117620 - solute carrier family 35 member A3
	RBM7 Gene (Entity type)	ENSG00000076053 - RNA binding motif protein 7
	PSEN1 Gene (Entity type)	ENSG00000080815 - presenilin 1
	VPS13B Gene (Entity type)	ENSG00000132549 - vacuolar protein sorting 13 homolog B
	CCL13 Gene (Entity type)	ENSG00000181374 - C-C motif chemokine ligand 13
	SMAD2 Gene (Entity type)	ENSG00000175387 - SMAD family member 2
	VAMP4 Gene (Entity type)	ENSG00000117533 - vesicle associated membrane protein 4
	IMPA1 Gene (Entity type)	ENSG00000133731 - inositol monophosphatase 1
	USP9X Gene (Entity type)	ENSG00000124486 - ubiquitin specific peptidase 9 X-linked

TPRKB

Gene (Entity type)

ENSG00000144034 - TP53RK binding protein

SLC35A3

Gene (Entity type)

ENSG00000117620 - solute carrier family 35 member A3

RBM7

Gene (Entity type)

ENSG00000076053 - RNA binding motif protein 7

PSEN1

Gene (Entity type)

ENSG00000080815 - presenilin 1

VPS13B

Gene (Entity type)

ENSG00000132549 - vacuolar protein sorting 13 homolog B

CCL13

Gene (Entity type)

ENSG00000181374 - C-C motif chemokine ligand 13

SMAD2

Gene (Entity type)

ENSG00000175387 - SMAD family member 2

VAMP4

Gene (Entity type)

ENSG00000117533 - vesicle associated membrane protein 4

IMPA1

Gene (Entity type)

ENSG00000133731 - inositol monophosphatase 1

USP9X

Gene (Entity type)

ENSG00000124486 - ubiquitin specific peptidase 9 X-linked

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.