SEMA3G Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SEMA3G Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SEMA3G Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SEMA3G Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SEMA3G Down.

Results found

Linked to

	Label	Description
	CPNE3 Gene (Entity type)	ENSG00000085719 - copine 3
	NDUFB6 Gene (Entity type)	ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6
	NR3C2 Gene (Entity type)	ENSG00000151623 - nuclear receptor subfamily 3 group C member 2
	RAB11A Gene (Entity type)	ENSG00000103769 - RAB11A, member RAS oncogene family
	CTNNBIP1 Gene (Entity type)	ENSG00000178585 - catenin beta interacting protein 1
	SRP9 Gene (Entity type)	ENSG00000143742 - signal recognition particle 9
	TWF2 Gene (Entity type)	ENSG00000247596 - twinfilin actin binding protein 2
	COX5A Gene (Entity type)	ENSG00000178741 - cytochrome c oxidase subunit 5A
	HS3ST2 Gene (Entity type)	ENSG00000122254 - heparan sulfate-glucosamine 3-sulfotransferase 2
	IFT52 Gene (Entity type)	ENSG00000101052 - intraflagellar transport 52

CPNE3

Gene (Entity type)

ENSG00000085719 - copine 3

NDUFB6

Gene (Entity type)

ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6

NR3C2

Gene (Entity type)

ENSG00000151623 - nuclear receptor subfamily 3 group C member 2

RAB11A

Gene (Entity type)

ENSG00000103769 - RAB11A, member RAS oncogene family

CTNNBIP1

Gene (Entity type)

ENSG00000178585 - catenin beta interacting protein 1

SRP9

Gene (Entity type)

ENSG00000143742 - signal recognition particle 9

TWF2

Gene (Entity type)

ENSG00000247596 - twinfilin actin binding protein 2

COX5A

Gene (Entity type)

ENSG00000178741 - cytochrome c oxidase subunit 5A

HS3ST2

Gene (Entity type)

ENSG00000122254 - heparan sulfate-glucosamine 3-sulfotransferase 2

IFT52

Gene (Entity type)

ENSG00000101052 - intraflagellar transport 52

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.