DFFA Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with DFFA Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with DFFA Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with DFFA Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with DFFA Up.

Results found

Linked to

	Label	Description
	PLOD3 Gene (Entity type)	ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
	C9 Gene (Entity type)	ENSG00000113600 - complement C9
	UBAP2 Gene (Entity type)	ENSG00000137073 - ubiquitin associated protein 2
	PWWP3A Gene (Entity type)	ENSG00000160953 - PWWP domain containing 3A, DNA repair factor
	TRHDE Gene (Entity type)	ENSG00000072657 - thyrotropin releasing hormone degrading enzyme
	GYS2 Gene (Entity type)	ENSG00000111713 - glycogen synthase 2
	STK25 Gene (Entity type)	ENSG00000115694 - serine/threonine kinase 25
	OPLAH Gene (Entity type)	ENSG00000178814 - 5-oxoprolinase, ATP-hydrolysing
	SUGCT Gene (Entity type)	ENSG00000175600 - succinyl-CoA:glutarate-CoA transferase
	MICAL3 Gene (Entity type)	ENSG00000243156 - microtubule associated monooxygenase, calponin and LIM domain containing 3

PLOD3

Gene (Entity type)

ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

Gene (Entity type)

ENSG00000113600 - complement C9

UBAP2

Gene (Entity type)

ENSG00000137073 - ubiquitin associated protein 2

PWWP3A

Gene (Entity type)

ENSG00000160953 - PWWP domain containing 3A, DNA repair factor

TRHDE

Gene (Entity type)

ENSG00000072657 - thyrotropin releasing hormone degrading enzyme

GYS2

Gene (Entity type)

ENSG00000111713 - glycogen synthase 2

STK25

Gene (Entity type)

ENSG00000115694 - serine/threonine kinase 25

OPLAH

Gene (Entity type)

ENSG00000178814 - 5-oxoprolinase, ATP-hydrolysing

SUGCT

Gene (Entity type)

ENSG00000175600 - succinyl-CoA:glutarate-CoA transferase

MICAL3

Gene (Entity type)

ENSG00000243156 - microtubule associated monooxygenase, calponin and LIM domain containing 3

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.