GSE133447 GSE133448 MED25 ETV4 knockdown UFERSA-PC3 2 v 1 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE133447_GSE133448_MED25_ETV4 knockdown_UFERSA-PC3_2_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE133447_GSE133448_MED25_ETV4 knockdown_UFERSA-PC3_2_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE133447_GSE133448_MED25_ETV4 knockdown_UFERSA-PC3_2_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE133447_GSE133448_MED25_ETV4 knockdown_UFERSA-PC3_2_v_1_human_dn.

Results found

Linked to

	Label	Description
	VARS1 Gene (Entity type)	valyl-tRNA synthetase 1
	H2BC8 Gene Gene (Entity type)	H2B clustered histone 8
	MRPS18B Gene (Entity type)	mitochondrial ribosomal protein S18B
	RPS18 Gene (Entity type)	ribosomal protein S18
	SNHG1 Gene (Entity type)	small nucleolar RNA host gene 1
	GAS5 Gene (Entity type)	growth arrest specific 5
	H2AC11 Gene (Entity type)	H2A clustered histone 11
	GGNBP2 Gene (Entity type)	gametogenetin binding protein 2
	SNHG4 Gene (Entity type)	small nucleolar RNA host gene 4
	PVT1 Gene (Entity type)	Pvt1 oncogene

VARS1

Gene (Entity type)

valyl-tRNA synthetase 1

H2BC8 Gene

Gene (Entity type)

H2B clustered histone 8

MRPS18B

Gene (Entity type)

mitochondrial ribosomal protein S18B

RPS18

Gene (Entity type)

ribosomal protein S18

SNHG1

Gene (Entity type)

small nucleolar RNA host gene 1

GAS5

Gene (Entity type)

growth arrest specific 5

H2AC11

Gene (Entity type)

H2A clustered histone 11

GGNBP2

Gene (Entity type)

gametogenetin binding protein 2

SNHG4

Gene (Entity type)

small nucleolar RNA host gene 4

PVT1

Gene (Entity type)

Pvt1 oncogene

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.