LTB Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with LTB Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with LTB Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with LTB Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with LTB Down.

Results found

Linked to

	Label	Description
	TTC28 Gene (Entity type)	ENSG00000100154 - tetratricopeptide repeat domain 28
	TM4SF20 Gene (Entity type)	ENSG00000168955 - transmembrane 4 L six family member 20
	GSS Gene (Entity type)	ENSG00000100983 - glutathione synthetase
	MINDY3 Gene (Entity type)	ENSG00000148481 - MINDY lysine 48 deubiquitinase 3
	ZNF329 Gene (Entity type)	ENSG00000181894 - zinc finger protein 329
	MDC1 Gene (Entity type)	ENSG00000137337 - mediator of DNA damage checkpoint 1
	ADCY2 Gene (Entity type)	ENSG00000078295 - adenylate cyclase 2
	C1GALT1 Gene (Entity type)	ENSG00000106392 - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
	SEC16A Gene (Entity type)	ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor
	BICRAL Gene (Entity type)	ENSG00000112624 - BICRA like chromatin remodeling complex associated protein

TTC28

Gene (Entity type)

ENSG00000100154 - tetratricopeptide repeat domain 28

TM4SF20

Gene (Entity type)

ENSG00000168955 - transmembrane 4 L six family member 20

GSS

Gene (Entity type)

ENSG00000100983 - glutathione synthetase

MINDY3

Gene (Entity type)

ENSG00000148481 - MINDY lysine 48 deubiquitinase 3

ZNF329

Gene (Entity type)

ENSG00000181894 - zinc finger protein 329

MDC1

Gene (Entity type)

ENSG00000137337 - mediator of DNA damage checkpoint 1

ADCY2

Gene (Entity type)

ENSG00000078295 - adenylate cyclase 2

C1GALT1

Gene (Entity type)

ENSG00000106392 - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1

SEC16A

Gene (Entity type)

ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor

BICRAL

Gene (Entity type)

ENSG00000112624 - BICRA like chromatin remodeling complex associated protein

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Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.