GSE176008 pyridoxine 0 v 3 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE176008_pyridoxine_0_v_3_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE176008_pyridoxine_0_v_3_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE176008_pyridoxine_0_v_3_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE176008_pyridoxine_0_v_3_human_up.

Results found

Linked to

	Label	Description
	ARHGAP23 Gene (Entity type)	Rho GTPase activating protein 23
	H3C7 Gene (Entity type)	H3 clustered histone 7
	RPS18 Gene (Entity type)	ribosomal protein S18
	FAM106A Gene (Entity type)	family with sequence similarity 106 member A
	SNHG5 Gene (Entity type)	small nucleolar RNA host gene 5
	H2AC11 Gene (Entity type)	H2A clustered histone 11
	GOLGA2P7 Gene (Entity type)	GOLGA2 pseudogene 7
	OIP5-AS1 Gene (Entity type)	OIP5 antisense RNA 1
	POLR2J3 Gene (Entity type)	RNA polymerase II subunit J3
	CRNDE Gene (Entity type)	colorectal neoplasia differentially expressed

ARHGAP23

Gene (Entity type)

Rho GTPase activating protein 23

H3C7

Gene (Entity type)

H3 clustered histone 7

RPS18

Gene (Entity type)

ribosomal protein S18

FAM106A

Gene (Entity type)

family with sequence similarity 106 member A

SNHG5

Gene (Entity type)

small nucleolar RNA host gene 5

H2AC11

Gene (Entity type)

H2A clustered histone 11

GOLGA2P7

Gene (Entity type)

GOLGA2 pseudogene 7

OIP5-AS1

Gene (Entity type)

OIP5 antisense RNA 1

POLR2J3

Gene (Entity type)

RNA polymerase II subunit J3

CRNDE

Gene (Entity type)

colorectal neoplasia differentially expressed

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.