GSE213611 NUF2 knockdown OVCAR-3 1 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE213611_NUF2 knockdown_OVCAR-3_1_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE213611_NUF2 knockdown_OVCAR-3_1_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE213611_NUF2 knockdown_OVCAR-3_1_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE213611_NUF2 knockdown_OVCAR-3_1_v_0_human_up.

Results found

Linked to

	Label	Description
	H2AC19 Gene (Entity type)	H2A clustered histone 19
	UCA1 Gene (Entity type)	urothelial cancer associated 1
	LINC-PINT Gene (Entity type)	long intergenic non-protein coding RNA, p53 induced transcript
	LINC00707 Gene (Entity type)	long intergenic non-protein coding RNA 707
	LINC02582 Gene (Entity type)	long intergenic non-protein coding RNA 2582
	LINC00520 Gene (Entity type)	long intergenic non-protein coding RNA 520
	LINC02535 Gene (Entity type)	long intergenic non-protein coding RNA 2535
	LINC01629 Gene (Entity type)	long intergenic non-protein coding RNA 1629
	SACK1A-AS1 Gene (Entity type)	SACK1A antisense RNA 1
	LINC01537 Gene (Entity type)	long intergenic non-protein coding RNA 1537

H2AC19

Gene (Entity type)

H2A clustered histone 19

UCA1

Gene (Entity type)

urothelial cancer associated 1

LINC-PINT

Gene (Entity type)

long intergenic non-protein coding RNA, p53 induced transcript

LINC00707

Gene (Entity type)

long intergenic non-protein coding RNA 707

LINC02582

Gene (Entity type)

long intergenic non-protein coding RNA 2582

LINC00520

Gene (Entity type)

long intergenic non-protein coding RNA 520

LINC02535

Gene (Entity type)

long intergenic non-protein coding RNA 2535

LINC01629

Gene (Entity type)

long intergenic non-protein coding RNA 1629

SACK1A-AS1

Gene (Entity type)

SACK1A antisense RNA 1

LINC01537

Gene (Entity type)

long intergenic non-protein coding RNA 1537

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.