GSE213611 NUF2 knockdown OVCAR-3 1 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE213611_NUF2 knockdown_OVCAR-3_1_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE213611_NUF2 knockdown_OVCAR-3_1_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE213611_NUF2 knockdown_OVCAR-3_1_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE213611_NUF2 knockdown_OVCAR-3_1_v_0_human_up.

Results found

Linked to

	Label	Description
	OXSR1 Gene (Entity type)	ENSG00000172939 - oxidative stress responsive kinase 1
	PPP2R2C Gene (Entity type)	ENSG00000074211 - protein phosphatase 2 regulatory subunit Bgamma
	HDAC5 Gene (Entity type)	ENSG00000108840 - histone deacetylase 5
	MAP2K3 Gene (Entity type)	ENSG00000034152 - mitogen-activated protein kinase kinase 3
	RAB7A Gene (Entity type)	ENSG00000075785 - RAB7A, member RAS oncogene family
	PPP1CC Gene (Entity type)	ENSG00000186298 - protein phosphatase 1 catalytic subunit gamma
	B4GALT4 Gene (Entity type)	ENSG00000121578 - beta-1,4-galactosyltransferase 4
	CD68 Gene (Entity type)	ENSG00000129226 - CD68 molecule
	TOB2 Gene (Entity type)	ENSG00000183864 - transducer of ERBB2, 2
	DNAJC5 Gene (Entity type)	ENSG00000101152 - DnaJ heat shock protein family (Hsp40) member C5

OXSR1

Gene (Entity type)

ENSG00000172939 - oxidative stress responsive kinase 1

PPP2R2C

Gene (Entity type)

ENSG00000074211 - protein phosphatase 2 regulatory subunit Bgamma

HDAC5

Gene (Entity type)

ENSG00000108840 - histone deacetylase 5

MAP2K3

Gene (Entity type)

ENSG00000034152 - mitogen-activated protein kinase kinase 3

RAB7A

Gene (Entity type)

ENSG00000075785 - RAB7A, member RAS oncogene family

PPP1CC

Gene (Entity type)

ENSG00000186298 - protein phosphatase 1 catalytic subunit gamma

B4GALT4

Gene (Entity type)

ENSG00000121578 - beta-1,4-galactosyltransferase 4

CD68

Gene (Entity type)

ENSG00000129226 - CD68 molecule

TOB2

Gene (Entity type)

ENSG00000183864 - transducer of ERBB2, 2

DNAJC5

Gene (Entity type)

ENSG00000101152 - DnaJ heat shock protein family (Hsp40) member C5

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.