GSE193739 CGA knockdown 3 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE193739_CGA knockdown_3_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE193739_CGA knockdown_3_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE193739_CGA knockdown_3_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE193739_CGA knockdown_3_v_1_human_up.

Results found

Linked to

	Label	Description
	PTPN12 Gene (Entity type)	ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12
	GALE Gene (Entity type)	ENSG00000117308 - UDP-galactose-4-epimerase
	PPP2R2C Gene (Entity type)	ENSG00000074211 - protein phosphatase 2 regulatory subunit Bgamma
	AGL Gene (Entity type)	ENSG00000162688 - amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase
	DFFA Gene (Entity type)	ENSG00000160049 - DNA fragmentation factor subunit alpha
	SLC22A5 Gene (Entity type)	ENSG00000197375 - solute carrier family 22 member 5
	TLE3 Gene (Entity type)	ENSG00000140332 - TLE family member 3, transcriptional corepressor
	SLC35A3 Gene (Entity type)	ENSG00000117620 - solute carrier family 35 member A3
	EIF4A2 Gene (Entity type)	ENSG00000156976 - eukaryotic translation initiation factor 4A2
	NR1H3 Gene (Entity type)	ENSG00000025434 - nuclear receptor subfamily 1 group H member 3

PTPN12

Gene (Entity type)

ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12

GALE

Gene (Entity type)

ENSG00000117308 - UDP-galactose-4-epimerase

PPP2R2C

Gene (Entity type)

ENSG00000074211 - protein phosphatase 2 regulatory subunit Bgamma

AGL

Gene (Entity type)

ENSG00000162688 - amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase

DFFA

Gene (Entity type)

ENSG00000160049 - DNA fragmentation factor subunit alpha

SLC22A5

Gene (Entity type)

ENSG00000197375 - solute carrier family 22 member 5

TLE3

Gene (Entity type)

ENSG00000140332 - TLE family member 3, transcriptional corepressor

SLC35A3

Gene (Entity type)

ENSG00000117620 - solute carrier family 35 member A3

EIF4A2

Gene (Entity type)

ENSG00000156976 - eukaryotic translation initiation factor 4A2

NR1H3

Gene (Entity type)

ENSG00000025434 - nuclear receptor subfamily 1 group H member 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.