hmgi1 mid vagina (Collection)

Subset Collection:

hmgi1

Collection (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Has Time Series Data:false

Description:The collection contains gene index files generated by running gene predictions and annotations on assemblies from individual mid_vagina sample reads, after quality control screening. Gene sequence and annotation is provided in gff3 format, nucleotide and protein sequences in multi-FASTA format. Functional attributes assigned to each gene prediction include gene name, gene symbol, Gene Ontology (GO) assignments and Enzyme Commission (EC) numbers.

Abbreviation:hmgi1_mid_vagina

Results found

Linked to

	Label	Description
	SRS015072 Biosample (Entity type)	A biosample produced as part of the HHS project
	SRS015072 nucleotide.fasta.bz2 File (Entity type)	A 932 KB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgi1 Collection (Entity type)	Gene Index: The collection contains gene index files generated by running gene predictions and annot...
	SRS014466.with fasta.gff3.bz2 File (Entity type)	A 1.45 MB file from HMP produced from OBI:0002623 as part of the HHS project
	HHS 763577454 Subject (Entity type)	A subject produced as part of the HHS project
	SRS014466 aa.fasta.bz2 File (Entity type)	A 471 KB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS015072.with fasta.gff3.bz2 File (Entity type)	A 1.83 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS014466 nucleotide.fasta.bz2 File (Entity type)	A 725 KB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS015072 aa.fasta.bz2 File (Entity type)	A 605 KB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS014466 Biosample (Entity type)	A biosample from HMP produced as part of the HHS project

SRS015072

Biosample (Entity type)

A biosample produced as part of the HHS project

SRS015072 nucleotide.fasta.bz2

File (Entity type)

A 932 KB file from HMP produced from OBI:0002623 as part of the HHS project

hmgi1

Collection (Entity type)

Gene Index: The collection contains gene index files generated by running gene predictions and annot...

SRS014466.with fasta.gff3.bz2

File (Entity type)

A 1.45 MB file from HMP produced from OBI:0002623 as part of the HHS project

HHS 763577454

Subject (Entity type)

A subject produced as part of the HHS project

SRS014466 aa.fasta.bz2

File (Entity type)

A 471 KB file from HMP produced from OBI:0002623 as part of the HHS project

SRS015072.with fasta.gff3.bz2

File (Entity type)

A 1.83 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS014466 nucleotide.fasta.bz2

File (Entity type)

A 725 KB file from HMP produced from OBI:0002623 as part of the HHS project

SRS015072 aa.fasta.bz2

File (Entity type)

A 605 KB file from HMP produced from OBI:0002623 as part of the HHS project

SRS014466

Biosample (Entity type)

A biosample from HMP produced as part of the HHS project

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.