hmgi1 tongue dorsum (Collection)

Subset Collection:

hmgi1

Collection (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Has Time Series Data:false

Description:The collection contains gene index files generated by running gene predictions and annotations on assemblies from individual tongue_dorsum sample reads, after quality control screening. Gene sequence and annotation is provided in gff3 format, nucleotide and protein sequences in multi-FASTA format. Functional attributes assigned to each gene prediction include gene name, gene symbol, Gene Ontology (GO) assignments and Enzyme Commission (EC) numbers.

Abbreviation:hmgi1_tongue_dorsum

Results found

Linked to

	Label	Description
	SRS047824 aa.fasta.bz2 File (Entity type)	A 18.6 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS063288.with fasta.gff3.bz2 File (Entity type)	A 42.4 MB file from HMP produced from OBI:0002623 as part of the HHS project
	HHS 763536994 Subject (Entity type)	A subject from HMP produced as part of the HHS project
	SRS024441 nucleotide.fasta.bz2 File (Entity type)	A 30.1 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS050244 Biosample (Entity type)	A biosample produced as part of the HHS project
	SRS024580 aa.fasta.bz2 File (Entity type)	A 12.9 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS050244 nucleotide.fasta.bz2 File (Entity type)	A 39.6 MB file from HMP produced from OBI:0002623 as part of the HHS project
	HHS 159510762 Subject (Entity type)	A subject produced as part of the HHS project
	SRS063932.with fasta.gff3.bz2 File (Entity type)	A 94.3 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS022719 nucleotide.fasta.bz2 File (Entity type)	A 21.7 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS047824 aa.fasta.bz2

File (Entity type)

A 18.6 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS063288.with fasta.gff3.bz2

File (Entity type)

A 42.4 MB file from HMP produced from OBI:0002623 as part of the HHS project

HHS 763536994

Subject (Entity type)

A subject from HMP produced as part of the HHS project

SRS024441 nucleotide.fasta.bz2

File (Entity type)

A 30.1 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS050244

Biosample (Entity type)

A biosample produced as part of the HHS project

SRS024580 aa.fasta.bz2

File (Entity type)

A 12.9 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS050244 nucleotide.fasta.bz2

File (Entity type)

A 39.6 MB file from HMP produced from OBI:0002623 as part of the HHS project

HHS 159510762

Subject (Entity type)

A subject produced as part of the HHS project

SRS063932.with fasta.gff3.bz2

File (Entity type)

A 94.3 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS022719 nucleotide.fasta.bz2

File (Entity type)

A 21.7 MB file from HMP produced from OBI:0002623 as part of the HHS project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.